RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 C9orf72Q96LT7 481 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 TRIM56Q9BRZ2 755 aaKnown RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 PHF20Q9BVI0 1012 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 TCRBV5S4A2TA0A5A2 114 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 MAGEA13PA6NCF6 341 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 ORC4O43929 436 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 GCNT3O95395 438 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 SERPING1P05155 500 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 MAN1A1P33908 653 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 HSPA9P38646 679 aaKnown RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 KCNJ1P48048 391 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 RASGRF1Q13972 1273 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 SPARCL1Q14515 664 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 ANO4Q32M45 955 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 SLC25A41Q8N5S1 370 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 SPATA5Q8NB90 893 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 KLF6Q99612 283 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 EPAS1Q99814 870 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 HEMGNQ9BXL5 484 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 CTDP1Q9Y5B0 961 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 CCDC195A0A1B0GUA6 201 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 FAM13AO94988 1023 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 TRIP10Q15642 601 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 PHACTR1Q9C0D0 580 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 CHORDC1Q9UHD1 332 aaPredicted RBP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYNRG-229ENST00000621136 MEGF6O75095 1541 aa13.38□□□□□ -0.27
SYNRG-229ENST00000621136 CCDC189A1A4V9 331 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 CHMP2AO43633 222 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 CBX6O95503 412 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 PLCG1P19174 1290 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 ACAP1Q15027 740 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 SMAD1Q15797 465 aaKnown RBP13.37□□□□□ -0.27
SYNRG-229ENST00000621136 CAVIN4Q5BKX8 364 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 ANO5Q75V66 913 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 ZNF507Q8TCN5 953 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 ZNF653Q96CK0 615 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.37□□□□□ -0.271e-7■■■■■ 27.9
SYNRG-229ENST00000621136 THAP9Q9H5L6 903 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 MRGBPQ9NV56 204 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 TXNDC16Q9P2K2 825 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 CCDC188H7C350 402 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 NOP56O00567 594 aaKnown RBP13.37□□□□□ -0.27
SYNRG-229ENST00000621136 GMNNO75496 209 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 PDE8BO95263 885 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 TBC1D10BQ4KMP7 808 aaPredicted RBP13.37□□□□□ -0.27
SYNRG-229ENST00000621136 FAM83BQ5T0W9 1011 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 THEGQ9P2T0 379 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 KLHL33A6NCF5 533 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 CLIC2O15247 247 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 SEC24DO94855 1032 aaPredicted RBP13.37□□□□□ -0.27
SYNRG-229ENST00000621136 PCCAP05165 728 aaPredicted RBP13.37□□□□□ -0.27
SYNRG-229ENST00000621136 PYGBP11216 843 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 PLS3P13797 630 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 AP2B1P63010 937 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 IYDQ6PHW0 289 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 GALNT4Q8N4A0 578 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 PDZD8Q8NEN9 1154 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 THAP11Q96EK4 314 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 DHTKD1Q96HY7 919 aaPredicted RBP13.37□□□□□ -0.27
SYNRG-229ENST00000621136 TMEM60Q9H2L4 133 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 BCS1LQ9Y276 419 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 MYH13Q9UKX3 1938 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 IZUMO2Q6UXV1 221 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 ENAHQ8N8S7 591 aaPredicted RBP13.37□□□□□ -0.27
SYNRG-229ENST00000621136 TRIM55Q9BYV6 548 aa13.37□□□□□ -0.27
SYNRG-229ENST00000621136 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
SYNRG-229ENST00000621136 A0A1W2PQC6 194 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 SRGNP10124 158 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 RPL13P26373 211 aaKnown RBP13.36□□□□□ -0.27
SYNRG-229ENST00000621136 ZNF844Q08AG5 666 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 BLIDQ8IZY5 108 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 LRGUKQ96M69 825 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 DRC3Q9H069 523 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 MCF2LO15068 1137 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 EPHB6O15197 1021 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 ATP5HO75947 161 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 NR2F2P24468 414 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 PHBP35232 272 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 ANKRD40Q6AI12 368 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 AGGF1Q8N302 714 aaeCLIP13.36□□□□□ -0.27
SYNRG-229ENST00000621136 SCG3Q8WXD2 468 aaKnown RBP13.36□□□□□ -0.27
SYNRG-229ENST00000621136 GIPC1O14908 333 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 RTN3O95197 1032 aaPredicted RBP13.36□□□□□ -0.27
SYNRG-229ENST00000621136 PPP1R2P41236 205 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 ARFIP2P53365 341 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 ICA1Q05084 483 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 MEA1Q16626 185 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 C10orf76Q5T2E6 689 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 FAM118BQ9BPY3 351 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 FAM129AQ9BZQ8 928 aa13.36□□□□□ -0.27
SYNRG-229ENST00000621136 SALL4Q9UJQ4 1053 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms