RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 RBBP8NLQ8NC74 664 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 C18orf8Q96DM3 657 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NRBF2Q96F24 287 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 CEP72Q9P209 647 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 RNF103-CHMP3A0A140T963 221 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PJA2O43164 708 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PRKAB2O43741 272 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KRT7P08729 469 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 IL15P40933 162 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 CYP4A11Q02928 519 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SCYL2Q6P3W7 929 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 DDHD1Q8NEL9 900 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NSL1Q96IY1 281 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KIAA1683Q9H0B3 1180 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PREBQ9HCU5 417 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 TRNAU1APQ9NX07 287 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 CAPN15O75808 1086 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ROR2Q01974 943 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ZNF844Q08AG5 666 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 FLOT2Q14254 428 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SLC9A5Q14940 896 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NECTIN1Q15223 517 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 IQSEC1Q6DN90 963 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 LRRC8EQ6NSJ5 796 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PATL1Q86TB9 770 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ASZ1Q8WWH4 475 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 TMA16Q96EY4 203 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 C9orf72Q96LT7 481 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NKX1-2Q9UD57 310 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 RTN3O95197 1032 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 GNL1P36915 607 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 MRPL28Q13084 256 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 REXO4Q9GZR2 422 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 HERC5Q9UII4 1024 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KIAA1024Q9UPX6 916 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 E9PMD0 336 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KLHL41O60662 606 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 XRCC5P13010 732 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ZNF18P17022 549 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 CLCN2P51788 898 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ERVK-24P63145 666 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ZYXQ15942 572 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SULT1C3Q6IMI6 304 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KCNB2Q92953 911 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 GJA10Q969M2 543 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 UBN2Q6ZU65 1347 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ITGA4P13612 1032 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 MAGP20916 626 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SERPINB1P30740 379 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SLC29A2Q14542 456 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 POMGNT1Q8WZA1 660 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 LPXNO60711 386 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 NBNO60934 754 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 FMNL1O95466 1100 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 RAB27AP51159 221 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ICA1Q05084 483 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 DEPDC1BQ8WUY9 529 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 EXT2Q93063 718 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PTPRGP23470 1445 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SMCO2A6NFE2 343 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 TBC1D12O60347 775 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 BCRP11274 1271 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SMARCA1P28370 1054 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SENP2Q9HC62 589 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PCDH12Q9NPG4 1184 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 AURKCQ9UQB9 309 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 SRPRBQ9Y5M8 271 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 AK5Q9Y6K8 562 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ARHGAP5Q13017 1502 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 DNM1LO00429 736 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 TSPAN9O75954 239 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 DRD4P21917 467 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ASPHQ12797 758 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 CEP55Q53EZ4 464 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 DARS2Q6PI48 645 aaKnown RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ANKLE2Q86XL3 938 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 RFX6Q8HWS3 928 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 TRIM59Q8IWR1 403 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 MCUQ8NE86 351 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 RNF25Q96BH1 459 aaPredicted RBP5.37□□□□□ -1.55
VPS13D-214ENST00000620676 KRT1P04264 644 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 PDE1BQ01064 536 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 APOA5Q6Q788 366 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 ANKFY1Q9P2R3 1169 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 RIMS2Q9UQ26 1411 aa5.37□□□□□ -1.55
VPS13D-214ENST00000620676 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
VPS13D-214ENST00000620676 SGSM1Q2NKQ1 1148 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 MEI1Q5TIA1 1274 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 TLK2Q86UE8 772 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 CDH24Q86UP0 819 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 ATL2Q8NHH9 583 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 EURLQ9NYK6 297 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 DOLKQ9UPQ8 538 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 PGM3O95394 542 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 STK4Q13043 487 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 LAYNQ6UX15 382 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 KCTD17Q8N5Z5 321 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 HPS1Q92902 700 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 BTBD6Q96KE9 485 aa5.36□□□□□ -1.55
VPS13D-214ENST00000620676 RUNDC3BQ96NL0 473 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms