RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 SLC9A1P19634 815 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 CASP4P49662 377 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 GUCY1A3Q02108 690 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 NBPF12Q5TAG4 269 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 CCDC181Q5TID7 509 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 PPP4R3CPQ6ZMV5 832 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 CCDC121Q6ZUS5 278 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 PARP9Q8IXQ6 854 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 IL31RAQ8NI17 732 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 LPAR1Q92633 364 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 OSBPL9Q96SU4 736 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 WRAP73Q9P2S5 460 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 SH3BP1Q9Y3L3 701 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 ASTN1O14525 1302 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 KRT14P02533 472 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 SERPING1P05155 500 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 EZRP15311 586 aaKnown RBP13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 DNA2P51530 1060 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 IFFO1Q0D2I5 559 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 PAK2Q13177 524 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 RINT1Q6NUQ1 792 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 ATP6V1G3Q96LB4 118 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 ALS2CR12Q96Q35 445 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 RAVER2Q9HCJ3 691 aaKnown RBP13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 ARMCX3Q9UH62 379 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 TRAF3IP3Q9Y228 551 aa13.74□□□□□ -0.21
PCDHGA4-202ENST00000612927 RPTORQ8N122 1335 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 A0A1B0GUA9 196 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 ZNF233A6NK53 670 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 PJA2O43164 708 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 CTNND1O60716 968 aaKnown RBP13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 ALAS1P13196 640 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 ITGB5P18084 799 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 SLC8A1P32418 973 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 IFT88Q13099 833 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 MTMR2Q13614 643 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 TCERG1LQ5VWI1 586 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 KCTD16Q68DU8 428 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 ARFGAP2Q8N6H7 521 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 FAXDC2Q96IV6 333 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 MXRA8Q9BRK3 442 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 PACSIN1Q9BY11 444 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 GDF3Q9NR23 364 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 HOMER2Q9NSB8 354 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 A0A087X0T9 212 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 FZD9O00144 591 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 FAM228BP0C875 321 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 VCAM1P19320 739 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 SLC7A5Q01650 507 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 CYB5D1Q6P9G0 228 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 B3GNT9Q6UX72 402 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 DNAAF5Q86Y56 855 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 KSR1Q8IVT5 923 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 SGSM3Q96HU1 749 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 CCDC114Q96M63 670 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 ATP6V0A4Q9HBG4 840 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 SLC38A10Q9HBR0 1119 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 PKD2L1Q9P0L9 805 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 RNF14Q9UBS8 474 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 ADAMTS1Q9UHI8 967 aa13.73□□□□□ -0.21
PCDHGA4-202ENST00000612927 ZNF541Q9H0D2 1346 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 LTBP3Q9NS15 1303 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 RBAK-RBAKDNI3L0D1 243 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 IPO5O00410 1097 aaKnown RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 FLOT1O75955 427 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 NR3C1P04150 777 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 KLHL30Q0D2K2 578 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 ZC2HC1CQ53FD0 456 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 P3H4Q92791 437 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 TEKT3Q9BXF9 490 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 TLR10Q9BXR5 811 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 AFPP02771 609 aaKnown RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 ITGB3BPQ13352 177 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 R3HDM1Q15032 1099 aaKnown RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 ASIC2Q16515 512 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 C1orf186Q6ZWK4 172 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 FUKQ8N0W3 1084 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 RNF217Q8TC41 542 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 SYN2Q92777 582 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 CYFIP2Q96F07 1278 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 NOX5Q96PH1 765 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 WDR11Q9BZH6 1224 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 AJAP1Q9UKB5 411 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 PCDHB13Q9Y5F0 798 aa13.72□□□□□ -0.21
PCDHGA4-202ENST00000612927 PDXKO00764 312 aa13.71□□□□□ -0.21
PCDHGA4-202ENST00000612927 XRCC5P13010 732 aaKnown RBP13.71□□□□□ -0.21
PCDHGA4-202ENST00000612927 KLRC1P26715 233 aa13.71□□□□□ -0.21
PCDHGA4-202ENST00000612927 EPHA7Q15375 998 aa13.71□□□□□ -0.21
PCDHGA4-202ENST00000612927 BMT2Q1RMZ1 405 aa13.71□□□□□ -0.21
PCDHGA4-202ENST00000612927 KLHDC7AQ5VTJ3 777 aa13.71□□□□□ -0.21
PCDHGA4-202ENST00000612927 PRAMEF18Q5VWM3 479 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms