RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 SENP7Q9BQF6 1050 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 A0A0A6YYK5 440 aaPredicted RBP12.98□□□□□ -0.33
SRRT-213ENST00000611405 C19orf81C9J6K1 198 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 CES2O00748 559 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 MAPK13O15264 365 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 P4HA2O15460 535 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 MAFGO15525 162 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 ATP9AO75110 1047 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 FTCDO95954 541 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 LMNB1P20700 586 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
SRRT-213ENST00000611405 UGCGQ16739 394 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 GLE1Q53GS7 698 aaKnown RBP12.98□□□□□ -0.33
SRRT-213ENST00000611405 ZNF746Q6NUN9 644 aaPredicted RBP12.98□□□□□ -0.33
SRRT-213ENST00000611405 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 REPS2Q8NFH8 660 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 VTI1AQ96AJ9 217 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 BCCIPQ9P287 314 aaKnown RBP eCLIP12.98□□□□□ -0.33
SRRT-213ENST00000611405 APEX2Q9UBZ4 518 aa12.98□□□□□ -0.33
SRRT-213ENST00000611405 PPP1R1BQ9UD71 204 aaPredicted RBP12.98□□□□□ -0.33
SRRT-213ENST00000611405 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
SRRT-213ENST00000611405 MYH10P35580 1976 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 TESPA1A2RU30 521 aaPredicted RBP12.97□□□□□ -0.33
SRRT-213ENST00000611405 H3BQF6 201 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 DDX3XO00571 662 aaKnown RBP eCLIP12.97□□□□□ -0.333e-25■□□□□ 10.6
SRRT-213ENST00000611405 BACH1O14867 736 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 EVI5O60447 810 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 CCNE2O96020 404 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 DSG3P32926 999 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 CETN1Q12798 172 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 HAUS6Q7Z4H7 955 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 LMBR1Q8WVP7 490 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 TAF4BQ92750 862 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 LRRC1Q9BTT6 524 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 MAF1Q9H063 256 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 DOCK1Q14185 1865 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 NCKAP1LP55160 1127 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 XKR9Q5GH70 373 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 SLC30A5Q8TAD4 765 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 MOV10L1Q9BXT6 1211 aaKnown RBP12.97□□□□□ -0.33
SRRT-213ENST00000611405 ADAMTS5Q9UNA0 930 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 RIPK3Q9Y572 518 aa12.97□□□□□ -0.33
SRRT-213ENST00000611405 LRRIQ3A6PVS8 624 aaPredicted RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 NR3C2P08235 984 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 TNNT3P45378 269 aaPredicted RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 NOP2P46087 812 aaKnown RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 VAMP7P51809 220 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 XXYLT1Q8NBI6 393 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 U2AF1L4Q8WU68 220 aaKnown RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 ZKSCAN4Q969J2 545 aaPredicted RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 HVCN1Q96D96 273 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 WNK4Q96J92 1243 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 ZCCHC17Q9NP64 241 aaKnown RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 MYH11P35749 1972 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 DKC1O60832 514 aaKnown RBP eCLIP12.96□□□□□ -0.33
SRRT-213ENST00000611405 ZMYND10O75800 440 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 MATR3P43243 847 aaKnown RBP eCLIP12.96□□□□□ -0.331e-8■■■■■ 28.4
SRRT-213ENST00000611405 NPEPPSP55786 919 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 SNRNP48Q6IEG0 339 aaKnown RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 RDH13Q8NBN7 331 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
SRRT-213ENST00000611405 MS4A14Q96JA4 679 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 PCIF1Q9H4Z3 704 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 SMARCAL1Q9NZC9 954 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 HSPBP1Q9NZL4 362 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 EHD2Q9NZN4 543 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 PCDHA10Q9Y5I2 948 aa12.96□□□□□ -0.33
SRRT-213ENST00000611405 A0A0U1RQG5 324 aaPredicted RBP12.95□□□□□ -0.34
SRRT-213ENST00000611405 ATP2A1O14983 1001 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 PEX3P56589 373 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 HSP90B2PQ58FF3 399 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 FAM102BQ5T8I3 360 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 ANGEL2Q5VTE6 544 aaKnown RBP12.95□□□□□ -0.34
SRRT-213ENST00000611405 OTUD6AQ7L8S5 288 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 LRRC57Q8N9N7 239 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 LMO3Q8TAP4 145 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 LNX1Q8TBB1 728 aaPredicted RBP12.95□□□□□ -0.34
SRRT-213ENST00000611405 PBKQ96KB5 322 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 INPP4AQ96PE3 977 aaPredicted RBP12.95□□□□□ -0.34
SRRT-213ENST00000611405 GPR88Q9GZN0 384 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 RBM12Q9NTZ6 932 aaKnown RBP12.95□□□□□ -0.34
SRRT-213ENST00000611405 PMM2O15305 246 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 SLC16A4O15374 487 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 TNFRSF8P28908 595 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 AARSP49588 968 aaKnown RBP eCLIP12.95□□□□□ -0.345e-6■■■□□ 15.1
SRRT-213ENST00000611405 SMTNP53814 917 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 HMGCS2P54868 508 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 MCCD1P59942 119 aaPredicted RBP12.95□□□□□ -0.34
SRRT-213ENST00000611405 C8orf74Q6P047 294 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 TPCN2Q8NHX9 752 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 FAM71BQ8TC56 605 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 AENQ8WTP8 325 aaKnown RBP12.95□□□□□ -0.34
SRRT-213ENST00000611405 CBWD1Q9BRT8 395 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 SYT11Q9BT88 431 aa12.95□□□□□ -0.34
SRRT-213ENST00000611405 STIM2Q9P246 746 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms