RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 CCZ1P86791 482 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 MAPK8IP2Q13387 824 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 TKFCQ3LXA3 575 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 C10orf76Q5T2E6 689 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 POTEAQ6S8J7 498 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ERICH1Q86X53 443 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 GPD1LQ8N335 351 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 FBXL13Q8NEE6 735 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 RUSC1Q9BVN2 902 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 MOV10L1Q9BXT6 1211 aaKnown RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 GPRC5CQ9NQ84 441 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 ANAPC7Q9UJX3 599 aa7.84□□□□□ -1.15
CSDE1-218ENST00000610726 PACSIN2Q9UNF0 486 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-218ENST00000610726 NCK2O43639 380 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 COPB2P35606 906 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 ATP1A2P50993 1020 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 MTMR3Q13615 1198 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 CDO1Q16878 200 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 MAP1SQ66K74 1059 aaPredicted RBP7.84□□□□□ -1.16
CSDE1-218ENST00000610726 RINT1Q6NUQ1 792 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 ANKS4BQ8N8V4 417 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 TC2NQ8N9U0 490 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 SREK1Q8WXA9 508 aaKnown RBP7.84□□□□□ -1.16
CSDE1-218ENST00000610726 WDR24Q96S15 920 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 PDE11AQ9HCR9 933 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 KBTBD4Q9NVX7 518 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 SEPT10Q9P0V9 454 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 SSX2IPQ9Y2D8 614 aa7.84□□□□□ -1.16
CSDE1-218ENST00000610726 NALCNQ8IZF0 1738 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PABPN1LA6NDY0 278 aaKnown RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 A6NJR5 290 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 FGGP02679 453 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 EPHX2P34913 555 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 TRIP13Q15645 432 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 KCTD16Q68DU8 428 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 CDR2LQ86X02 465 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 MAP7D3Q8IWC1 876 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 SYT2Q8N9I0 419 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 MGARPQ8TDB4 240 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 EPC1Q9H2F5 836 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 LRRC4Q9HBW1 653 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 NGRNQ9NPE2 291 aaKnown RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 TOPORSQ9NS56 1045 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 SAMD15Q9P1V8 674 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 SUCLA2Q9P2R7 463 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 AKAP12Q02952 1782 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 RGS16O15492 202 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 MED7O43513 233 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 FTLP02792 175 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PLS3P13797 630 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 ATF2P15336 505 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 ATP5DP30049 168 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 TMEM62Q0P6H9 643 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PDXDC1Q6P996 788 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 SLC51AQ86UW1 340 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 ERO1BQ86YB8 467 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 RFX6Q8HWS3 928 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PLCD3Q8N3E9 789 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 ANKRD42Q8N9B4 389 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 CHST13Q8NET6 341 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 GPRC5AQ8NFJ5 357 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 GRK7Q8WTQ7 553 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 ANKS1AQ92625 1134 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 FUCA2Q9BTY2 467 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 C2orf40Q9H1Z8 148 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 MAFGO15525 162 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 KRT1P04264 644 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 GYPCP04921 128 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PRKCBP05771 671 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 CIITAP33076 1130 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 GPC3P51654 580 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 ACTR2P61160 394 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 EMC2Q15006 297 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 RAD9BQ6WBX8 426 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 DSTYKQ6XUX3 929 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 CEP128Q6ZU80 1094 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PNMA8AQ86V59 439 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 AMIGO3Q86WK7 504 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 RHOT2Q8IXI1 618 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PALM2Q8IXS6 379 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 OR6J1Q8NGC5 347 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 NUDT12Q9BQG2 462 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 GLIS2Q9BZE0 524 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 XRN1Q8IZH2 1706 aaKnown RBP7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PASKQ96RG2 1323 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 PITPNM2Q9BZ72 1349 aa7.83□□□□□ -1.16
CSDE1-218ENST00000610726 A0A087X0B3 334 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 EIF3CLB5ME19 914 aaKnown RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SGK1O00141 431 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 CYP26A1O43174 497 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 BUB1BO60566 1050 aaPredicted RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SLC25A27O95847 323 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 VIL1P09327 827 aaKnown RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 UCHL3P15374 230 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 ZNF18P17022 549 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 PSMC6P62333 389 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 MXRA7P84157 204 aa7.82□□□□□ -1.16
CSDE1-218ENST00000610726 SNRNP35Q16560 246 aaKnown RBP7.82□□□□□ -1.16
CSDE1-218ENST00000610726 EDRF1Q3B7T1 1238 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms