RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 BMP6P22004 513 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 SLC8A1P32418 973 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 SCYL2Q6P3W7 929 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 CATSPER3Q86XQ3 398 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 LRRC8CQ8TDW0 803 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 RBM12Q9NTZ6 932 aaKnown RBP15.36■□□□□ 0.05
LINC02538-201ENST00000609107 POC1B-GALNT4F8VUJ3 575 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 INO80B-WBP1J3KQ70 363 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 MED7O43513 233 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 GALCP54803 685 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 INO80BQ9C086 356 aaPredicted RBP15.36■□□□□ 0.05
LINC02538-201ENST00000609107 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 NALCNQ8IZF0 1738 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 XRN1Q8IZH2 1706 aaKnown RBP15.36■□□□□ 0.05
LINC02538-201ENST00000609107 HERVK_113P62684 666 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
LINC02538-201ENST00000609107 NAA25Q14CX7 972 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 KLHDC7AQ5VTJ3 777 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 ADAM22Q9P0K1 906 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 TFR2Q9UP52 801 aa15.36■□□□□ 0.05
LINC02538-201ENST00000609107 TFAMQ00059 246 aaKnown RBP15.35■□□□□ 0.05
LINC02538-201ENST00000609107 CYP4F22Q6NT55 531 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.35■□□□□ 0.05
LINC02538-201ENST00000609107 PLEKP08567 350 aaPredicted RBP15.35■□□□□ 0.05
LINC02538-201ENST00000609107 KLRC1P26715 233 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 ZNF354CQ86Y25 554 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 SULF1Q8IWU6 871 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 ARHGEF2Q92974 986 aaKnown RBP15.35■□□□□ 0.05
LINC02538-201ENST00000609107 RNPC3Q96LT9 517 aaKnown RBP15.35■□□□□ 0.05
LINC02538-201ENST00000609107 NUP85Q9BW27 656 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 EVI5O60447 810 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 PMS2P54278 862 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 CAV1Q03135 178 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 NEDD9Q14511 834 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 CASC4Q6P4E1 433 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 VPS52Q8N1B4 723 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 EHD4Q9H223 541 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 L1RE1Q9UN81 338 aa15.35■□□□□ 0.05
LINC02538-201ENST00000609107 GYS1P13807 737 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 PMS1P54277 932 aaKnown RBP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 PPP2R2AP63151 447 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 SNCBQ16143 134 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 TADA2BQ86TJ2 420 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 ATP2A3Q93084 1043 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 AMACRQ9UHK6 382 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 LCMT1Q9UIC8 334 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 ZRANB2O95218 330 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 RINT1Q6NUQ1 792 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 RFX6Q8HWS3 928 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 RIT2Q99578 217 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 LACRTQ9GZZ8 138 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 INTUQ9ULD6 942 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 GOLGA8SH3BPF8 625 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 DALRD3Q5D0E6 543 aaKnown RBP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 ZNF746Q6NUN9 644 aaPredicted RBP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 FBXL13Q8NEE6 735 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 FAM163AQ96GL9 167 aaPredicted RBP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 VCPKMTQ9H867 229 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 FBXL5Q9UKA1 691 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 RTN2O75298 545 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 TRIP13Q15645 432 aaPredicted RBP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 PHLDB2Q86SQ0 1253 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 CCDC110Q8TBZ0 833 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 FAM151AQ8WW52 585 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 DCPSQ96C86 337 aaKnown RBP15.34■□□□□ 0.05
LINC02538-201ENST00000609107 FAM213AQ9BRX8 229 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 GABBR1Q9UBS5 961 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 STK38LQ9Y2H1 464 aa15.34■□□□□ 0.05
LINC02538-201ENST00000609107 LRRD1A4D1F6 860 aa15.33■□□□□ 0.05
LINC02538-201ENST00000609107 H7C0C1 242 aa15.33■□□□□ 0.05
LINC02538-201ENST00000609107 ATP5OP48047 213 aa15.33■□□□□ 0.05
LINC02538-201ENST00000609107 MAGOHP61326 146 aaKnown RBP15.33■□□□□ 0.05
LINC02538-201ENST00000609107 LMNTD2Q8IXW0 634 aa15.33■□□□□ 0.05
LINC02538-201ENST00000609107 RBM41Q96IZ5 413 aaKnown RBP15.33■□□□□ 0.05
LINC02538-201ENST00000609107 INTS13Q9NVM9 706 aa15.33■□□□□ 0.05
LINC02538-201ENST00000609107 COMMD10Q9Y6G5 202 aa15.33■□□□□ 0.05
LINC02538-201ENST00000609107 LMO7Q8WWI1 1683 aa15.33■□□□□ 0.05
LINC02538-201ENST00000609107 MYBL1P10243 752 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 STXBP2Q15833 593 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 TSNAXIP1Q2TAA8 658 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 SNRNP48Q6IEG0 339 aaKnown RBP15.33■□□□□ 0.04
LINC02538-201ENST00000609107 LRIG3Q6UXM1 1119 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 IFT122Q9HBG6 1241 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 PCDHA10Q9Y5I2 948 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 GMNCA6NCL1 334 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 YWHABP31946 246 aaKnown RBP15.33■□□□□ 0.04
LINC02538-201ENST00000609107 PCK1P35558 622 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 IRX5P78411 483 aaPredicted RBP15.33■□□□□ 0.04
LINC02538-201ENST00000609107 SLC35G2Q8TBE7 412 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 RNF34Q969K3 372 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 RGPD8O14715 1765 aaPredicted RBP15.33■□□□□ 0.04
LINC02538-201ENST00000609107 CLTAP09496 248 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 TMEM253P0C7T8 217 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 CLNS1AP54105 237 aaKnown RBP15.33■□□□□ 0.04
LINC02538-201ENST00000609107 TMED2Q15363 201 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 KIAA0895Q8NCT3 520 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 SAAL1Q96ER3 474 aa15.33■□□□□ 0.04
LINC02538-201ENST00000609107 DUSP9Q99956 384 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms