RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 EOMESO95936 686 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 HOXB8P17481 243 aaPredicted RBP16.71■□□□□ 0.27
CTSA-216ENST00000607212 PDIA3P30101 505 aaKnown RBP16.71■□□□□ 0.27
CTSA-216ENST00000607212 PTPN5P54829 565 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 RNASELQ05823 741 aaKnown RBP16.71■□□□□ 0.27
CTSA-216ENST00000607212 STK3Q13188 491 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 NTRK3Q16288 839 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 XKR3Q5GH77 459 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
CTSA-216ENST00000607212 RHPN2Q8IUC4 686 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 FBXL6Q8N531 539 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 SUSD6Q92537 303 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 KCNB2Q92953 911 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 NLRP4Q96MN2 994 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 INO80BQ9C086 356 aaPredicted RBP16.71■□□□□ 0.27
CTSA-216ENST00000607212 PIN4Q9Y237 131 aaKnown RBP16.71■□□□□ 0.27
CTSA-216ENST00000607212 C5orf42Q9H799 3197 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 ZNF318Q5VUA4 2279 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 A0A087WZ62 844 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 A0A0U1RQF3 1178 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
CTSA-216ENST00000607212 CXCL14O95715 111 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 BCAR1P56945 870 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 CDC42EP1Q00587 391 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 DRP2Q13474 957 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 PTPN21Q16825 1174 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 SYCE2Q6PIF2 218 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 CATSPER4Q7RTX7 472 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 BMP8AQ7Z5Y6 402 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 BLIDQ8IZY5 108 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 SLC39A11Q8N1S5 342 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 LPPQ93052 612 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 PRRX2Q99811 253 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 FDXACB1Q9BRP7 624 aaPredicted RBP16.7■□□□□ 0.26
CTSA-216ENST00000607212 LARP6Q9BRS8 491 aaKnown RBP16.7■□□□□ 0.26
CTSA-216ENST00000607212 GBP3Q9H0R5 595 aa16.7■□□□□ 0.26
CTSA-216ENST00000607212 SUCLA2Q9P2R7 463 aaPredicted RBP16.7■□□□□ 0.26
CTSA-216ENST00000607212 C2orf71A6NGG8 1288 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 DEXIO95424 95 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 SKIP12755 728 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 Q4G0T1 1027 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 RARS2Q5T160 578 aaKnown RBP16.69■□□□□ 0.26
CTSA-216ENST00000607212 IER5LQ5T953 404 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 GLB1LQ6UWU2 654 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 TMEM184AQ6ZMB5 413 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 PRSS33Q8NF86 280 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 JPH2Q9BR39 696 aaPredicted RBP16.69■□□□□ 0.26
CTSA-216ENST00000607212 S1PR5Q9H228 398 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 CHST12Q9NRB3 414 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 DDX25Q9UHL0 483 aaKnown RBP16.69■□□□□ 0.26
CTSA-216ENST00000607212 HCFC2Q9Y5Z7 792 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
CTSA-216ENST00000607212 CLASP2O75122 1294 aaKnown RBP16.68■□□□□ 0.26
CTSA-216ENST00000607212 PSMD10O75832 226 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 PHKA2P46019 1235 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 NONOQ15233 471 aaKnown RBP eCLIP16.68■□□□□ 0.26
CTSA-216ENST00000607212 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 PLA2G4FQ68DD2 849 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 RUFY3Q7L099 469 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 VPS52Q8N1B4 723 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 MRPL43Q8N983 215 aaKnown RBP16.68■□□□□ 0.26
CTSA-216ENST00000607212 AUTS2Q8WXX7 1259 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 RIPOR3Q96MK2 946 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 NECTIN4Q96NY8 510 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 NIFKQ9BYG3 293 aaKnown RBP16.68■□□□□ 0.26
CTSA-216ENST00000607212 CDH22Q9UJ99 828 aa16.68■□□□□ 0.26
CTSA-216ENST00000607212 CCDC194A0A1B0GVG4 234 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 WEE2P0C1S8 567 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 MTHFRP42898 656 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 PSMC5P62195 406 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 ITIH3Q06033 890 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 TARBP2Q15633 366 aaKnown RBP16.67■□□□□ 0.26
CTSA-216ENST00000607212 INF2Q27J81 1249 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 ZNF598Q86UK7 904 aaKnown RBP16.67■□□□□ 0.26
CTSA-216ENST00000607212 ZNF410Q86VK4 478 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 KSR1Q8IVT5 923 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 FBXL16Q8N461 479 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 KREMEN2Q8NCW0 462 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 URGCPQ8TCY9 931 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 PGBD4Q96DM1 585 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 FAM193BQ96PV7 902 aaPredicted RBP16.67■□□□□ 0.26
CTSA-216ENST00000607212 AGXT2Q9BYV1 514 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 POMKQ9H5K3 350 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
CTSA-216ENST00000607212 DBR1Q9UK59 544 aaKnown RBP16.67■□□□□ 0.26
CTSA-216ENST00000607212 KMT2EQ8IZD2 1858 aa16.67■□□□□ 0.26
CTSA-216ENST00000607212 EDIL3O43854 480 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 DKC1O60832 514 aaKnown RBP eCLIP16.66■□□□□ 0.26
CTSA-216ENST00000607212 SSBP05455 408 aaKnown RBP eCLIP16.66■□□□□ 0.26
CTSA-216ENST00000607212 RAB27AP51159 221 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 POLGP54098 1239 aaPredicted RBP16.66■□□□□ 0.26
CTSA-216ENST00000607212 VCPP55072 806 aaKnown RBP16.66■□□□□ 0.26
CTSA-216ENST00000607212 MTMR3Q13615 1198 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 KCNC3Q14003 757 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 NOMO2Q5JPE7 1267 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 KRT25Q7Z3Z0 450 aa16.66■□□□□ 0.26
CTSA-216ENST00000607212 C12orf76Q8N812 135 aaPredicted RBP16.66■□□□□ 0.26
CTSA-216ENST00000607212 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
CTSA-216ENST00000607212 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms