RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 EMC3Q9P0I2 261 aa6.3□□□□□ -1.4
COL4A3BP-207ENST00000604926 SATB2Q9UPW6 733 aa6.3□□□□□ -1.4
COL4A3BP-207ENST00000604926 MAPK8IP3Q9UPT6 1336 aa6.3□□□□□ -1.4
COL4A3BP-207ENST00000604926 DDX11L8A8MPP1 907 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SGK1O00141 431 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 APEHP13798 732 aaKnown RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ACADSBP45954 432 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ECM1Q16610 540 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SUPT20HL1Q3ZLR7 823 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 KRBOX4Q5JUW0 171 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SLC27A3Q5K4L6 730 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CD302Q8IX05 232 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 OTUD7AQ8TE49 926 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 BAP1Q92560 729 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SMARCE1Q969G3 411 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 EMID1Q96A84 441 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 TNIP3Q96KP6 325 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ERP44Q9BS26 406 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SARGQ9BW04 601 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 C8orf33Q9H7E9 229 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZWILCHQ9H900 591 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 PPP1R14DQ9NXH3 145 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 PCDHB2Q9Y5E7 798 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 GMEB1Q9Y692 573 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZNF536O15090 1300 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ENC1O14682 589 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CAPNS1P04632 268 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 POLR3DP05423 398 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ATF4P18848 351 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 POLR2GP62487 172 aaKnown RBP eCLIP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ITGB3BPQ13352 177 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 GALEQ14376 348 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 WLSQ5T9L3 541 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 KIRREL3Q8IZU9 778 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZFAND2BQ8WV99 257 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SUCLG2Q96I99 432 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 RUNDC3BQ96NL0 473 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 KCND1Q9NSA2 647 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 TTC7AQ9ULT0 858 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CLEC4AQ9UMR7 237 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 GPR52Q9Y2T5 361 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 RTCBQ9Y3I0 505 aaKnown RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 PCDHB3Q9Y5E6 796 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 PCDHGA2Q9Y5H1 932 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 PSMD14O00487 310 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 PPEF1O14829 653 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CHUKO15111 745 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SUPT3HO75486 399 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 IDH1O75874 414 aaKnown RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 GLI1P08151 1106 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CCR3P51677 355 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 YBEYP58557 167 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ARHGAP4P98171 946 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 NIPAL4Q0D2K0 466 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 MTMR1Q13613 665 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CUL2Q13617 745 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 GEN1Q17RS7 908 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 FAM102BQ5T8I3 360 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 OLFM4Q6UX06 510 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 NOSTRINQ8IVI9 506 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CCDC170Q8IYT3 715 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SCYL3Q8IZE3 742 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ANKRD53Q8N9V6 530 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ATP6V1G3Q96LB4 118 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 HS6ST2Q96MM7 605 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 NLRP4Q96MN2 994 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ATP13A3Q9H7F0 1226 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 CYP4F12Q9HCS2 524 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ARHGAP28Q9P2N2 729 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZMYND8Q9ULU4 1186 aaPredicted RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 ATP6V1DQ9Y5K8 247 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 TNRC6CQ9HCJ0 1690 aaKnown RBP6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 SLIT3O75094 1523 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 MYO3BQ8WXR4 1341 aa6.29□□□□□ -1.4
COL4A3BP-207ENST00000604926 NAIPQ13075 1403 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 OR5K4A6NMS3 321 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 CYTH3O43739 400 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 EOMESO95936 686 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZFYP08048 801 aaPredicted RBP6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 OR1G1P47890 313 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 TEAD4Q15561 434 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 ZNF124Q15973 351 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 Q3ZCU0 254 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 CCDC40Q4G0X9 1142 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 STK32CQ86UX6 486 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 GLYCTKQ8IVS8 523 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 RUFY2Q8WXA3 655 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 IRGQQ8WZA9 623 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 HIC2Q96JB3 615 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 ALG2Q9H553 416 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 PREBQ9HCU5 417 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 C8orf4Q9NR00 106 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 BATF3Q9NR55 127 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 SH2B1Q9NRF2 756 aaPredicted RBP6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 EHD2Q9NZN4 543 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 AXIN2Q9Y2T1 843 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 ATP7BP35670 1465 aa6.28□□□□□ -1.4
COL4A3BP-207ENST00000604926 TSC22D2O75157 780 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms