RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NPHP3Q7Z494 1330 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 KIF20BQ96Q89 1820 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 RGS12O14924 1447 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 SERTM1A2A2V5 107 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 VPS37CA5D8V6 355 aaPredicted RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 F5H423 210 aaPredicted RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 M0QX08 132 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 SPINT1O43278 529 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 NMT2O60551 498 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 HNRNPCP07910 306 aaKnown RBP eCLIP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 CCDC166P0CW27 439 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 ATF4P18848 351 aaPredicted RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 EPHB1P54762 984 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 GTF2IP78347 998 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 PDCLQ13371 301 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 XRCC4Q13426 336 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 ME3Q16798 604 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 CCDC152Q4G0S7 254 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 METTL24Q5JXM2 366 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 ISLR2Q6UXK2 745 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 KIAA0907Q7Z7F0 614 aaPredicted RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 FCHSD1Q86WN1 690 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 ZNF473Q8WTR7 871 aaKnown RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 SCG3Q8WXD2 468 aaKnown RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 INSM2Q96T92 566 aaPredicted RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 ZC3H7BQ9UGR2 993 aaKnown RBP5.11□□□□□ -1.59
LINC01109-201ENST00000603837 RTL1A6NKG5 1358 aa5.11□□□□□ -1.59
LINC01109-201ENST00000603837 A0A1W2PRU2 124 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 EIF4E1BA6NMX2 242 aaKnown RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 DNTTP04053 509 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TROVE2P10155 538 aaKnown RBP eCLIP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 BCRP11274 1271 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TRIM27P14373 513 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 PRKAR2BP31323 418 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 HSPA1LP34931 641 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 GUCY2FP51841 1108 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 HSPA2P54652 639 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ELF3P78545 371 aaPredicted RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 PFKPQ01813 784 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 STX1AQ16623 288 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TTC22Q5TAA0 569 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 C11orf57Q6ZUT1 292 aaPredicted RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ENOSF1Q7L5Y1 443 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TRIM50Q86XT4 487 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TRIML2Q8N7C3 387 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 USP38Q8NB14 1042 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 IL17RDQ8NFM7 739 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ARMC5Q96C12 935 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ZNF653Q96CK0 615 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 CEP95Q96GE4 821 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 FERD3LQ96RJ6 166 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 SH3GL2Q99962 352 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 YIPF4Q9BSR8 244 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 RAB6BQ9NRW1 208 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 NDFIP2Q9NV92 336 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ZNF112Q9UJU3 913 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 DGKBQ9Y6T7 804 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 UBN2Q6ZU65 1347 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ZFYVE9O95405 1425 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TRIM43BA6NCK2 446 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 GOLGA8AA7E2F4 631 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 GOLGA8KD6RF30 607 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 MEN1O00255 615 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ABLIM1O14639 778 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 SORBS3O60504 671 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 DGKIO75912 1065 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 CYP17A1P05093 508 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 IDUAP35475 653 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ATP5OP48047 213 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 USP11P51784 963 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 PDE1CQ14123 709 aaPredicted RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 SLC6A19Q695T7 634 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TMEM53Q6P2H8 277 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ERICH1Q86X53 443 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ANKRD35Q8N283 1001 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 PLD6Q8N2A8 252 aaKnown RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ABHD8Q96I13 439 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 DMAP1Q9NPF5 467 aaPredicted RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 GTF2IRD1Q9UHL9 959 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 PPP2R2CQ9Y2T4 447 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 SH3GLB1Q9Y371 365 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ANGPTL3Q9Y5C1 460 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 PCDHGA11Q9Y5H2 935 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 CHD2O14647 1828 aaKnown RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 DCCP43146 1447 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 RIMS2Q9UQ26 1411 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 TMEM247A6NEH6 219 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ZSCAN5CA6NGD5 496 aaPredicted RBP5.1□□□□□ -1.59
LINC01109-201ENST00000603837 POTECB2RU33 542 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 J3KRW8 73 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 NDC80O14777 642 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 KCNJ13O60928 360 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 IDO1P14902 403 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 SLC16A2P36021 539 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 STAT6P42226 847 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 RXRGP48443 463 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ATP1A2P50993 1020 aa5.1□□□□□ -1.59
LINC01109-201ENST00000603837 ADAM9Q13443 819 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms