RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SAMD9Q5K651 1589 aa9.27□□□□□ -0.93
CSMD1-216ENST00000602557 CCT8L1PA6NM43 557 aa9.27□□□□□ -0.93
CSMD1-216ENST00000602557 ANP32DO95626 131 aa9.27□□□□□ -0.93
CSMD1-216ENST00000602557 RABGAP1LQ5R372 815 aa9.27□□□□□ -0.93
CSMD1-216ENST00000602557 MAP4K1Q92918 833 aa9.27□□□□□ -0.93
CSMD1-216ENST00000602557 PDLIM2Q96JY6 352 aa9.27□□□□□ -0.93
CSMD1-216ENST00000602557 PPP1R16BQ96T49 567 aa9.27□□□□□ -0.93
CSMD1-216ENST00000602557 RNF26Q9BY78 433 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-216ENST00000602557 FOSL2P15408 326 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 FBXL13Q8NEE6 735 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 NPHS2Q9NP85 383 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 STK17AQ9UEE5 414 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 WDR47O94967 919 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 NXF1Q9UBU9 619 aaKnown RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 DNAJC5BQ9UF47 199 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 ZNF185O15231 689 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PRPSAP2O60256 369 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 FOSP01100 380 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 GYS1P13807 737 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 FGFR4P22455 802 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 OCRLQ01968 901 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 Q4G0T1 1027 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 DAB2IPQ5VWQ8 1189 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 EXOC8Q8IYI6 725 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 AK8Q96MA6 479 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 ZWILCHQ9H900 591 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 ABCF3Q9NUQ8 709 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 APOBEC2Q9Y235 224 aaKnown RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 CYP2D7A0A087X1C5 515 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PPP1R37O75864 691 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 HSPA4LO95757 839 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PCCAP05165 728 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 ANGPTL8Q6UXH0 198 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 SPATA21Q7Z572 469 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 DHX40Q8IX18 779 aaKnown RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 CDC26Q8NHZ8 85 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 ARL2BPQ9Y2Y0 163 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 SPHKAPQ2M3C7 1700 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 MMP1P03956 469 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PCP11498 1178 aaKnown RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 CRKLP46109 303 aaKnown RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 KLC3Q6P597 504 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 DDX42Q86XP3 938 aaKnown RBP eCLIP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 RGL1Q9NZL6 768 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 RNF217Q8TC41 542 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PPP1R36Q96LQ0 422 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 NRBP2Q9NSY0 501 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 LINC00854A0A1B0GVQ3 168 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 SEC24CP53992 1094 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 FKBP3Q00688 224 aaKnown RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 BTBD6Q96KE9 485 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PJA2O43164 708 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PMS2P54278 862 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 KCNA1Q09470 495 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 MAP3K15Q6ZN16 1313 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 CTIFO43310 598 aaKnown RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 KIF23Q02241 960 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-216ENST00000602557 DSG1Q02413 1049 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 RNF207Q6ZRF8 634 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 FOXR1Q6PIV2 292 aa9.26□□□□□ -0.93
CSMD1-216ENST00000602557 PLA2G4AP47712 749 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ST13P50502 369 aaKnown RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 IRAK1P51617 712 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 OSTNP61366 133 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PIGSQ96S52 555 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 MTRQ99707 1265 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 TLK1Q9UKI8 766 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 SH2B2O14492 632 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 CIAO1O76071 339 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 MED21Q13503 144 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 SULF1Q8IWU6 871 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 AGGF1Q8N302 714 aaeCLIP9.25□□□□□ -0.932e-8■■■■■ 37.2
CSMD1-216ENST00000602557 CDC42BPGQ6DT37 1551 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ABCD1P33897 745 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PLOD1Q02809 727 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 TRIP10Q15642 601 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ANO4Q32M45 955 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ATP6V0A4Q9HBG4 840 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 SUCLA2Q9P2R7 463 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PCDHB6Q9Y5E3 794 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 INSRP06213 1382 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 SERPING1P05155 500 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 MXI1P50539 228 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 WASHC5Q12768 1159 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 DEPDC1Q5TB30 811 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 HSPH1Q92598 858 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 PAGE5Q96GU1 130 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 MTA3Q9BTC8 594 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 XDHP47989 1333 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 CYP21A2P08686 494 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 CCND2P30279 289 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 ARFIP2P53365 341 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 MIS18BP1Q6P0N0 1132 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 SIX6OS1Q8N1H7 587 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 OSBPL5Q9H0X9 879 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-216ENST00000602557 VCPKMTQ9H867 229 aa9.25□□□□□ -0.93
CSMD1-216ENST00000602557 CYLDQ9NQC7 956 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms