RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 F8VZ95 297 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 EVI5O60447 810 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 MYL7Q01449 175 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 FAM102BQ5T8I3 360 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 NSUN6Q8TEA1 469 aaKnown RBP23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 STK33Q9BYT3 514 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 INTS2Q9H0H0 1204 aaKnown RBP23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 PCDHA10Q9Y5I2 948 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 FERP16591 822 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 DRAP1Q14919 205 aaPredicted RBP23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 ZSWIM2Q8NEG5 633 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 ANKEF1Q9NU02 776 aa23.56■■□□□ 1.36
GRAMD1A-212ENST00000600231 SOX5P35711 763 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 DNA2P51530 1060 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 ITIH3Q06033 890 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 TERF2Q15554 542 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 CCDC181Q5TID7 509 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 ZNF746Q6NUN9 644 aaPredicted RBP23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 TEX13BQ9BXU2 312 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 TSKSQ9UJT2 592 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 POLR2AP24928 1970 aaKnown RBP23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 GRID2IPA4D2P6 1211 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 DDX3XO00571 662 aaKnown RBP eCLIP23.55■■□□□ 1.369e-18■■■■■ 42
GRAMD1A-212ENST00000600231 KRT13P13646 458 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 MMGT1Q8N4V1 131 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 TIPINQ9BVW5 301 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 ST6GALNAC4Q9H4F1 302 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 A1CFQ9NQ94 594 aaKnown RBP23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 CYP39A1Q9NYL5 469 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 APEX2Q9UBZ4 518 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 NENFQ9UMX5 172 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 PACSIN2Q9UNF0 486 aaPredicted RBP23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 TELO2Q9Y4R8 837 aa23.55■■□□□ 1.36
GRAMD1A-212ENST00000600231 BTNL10A8MVZ5 291 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 MAFGO15525 162 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 KCNA2P16389 499 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 MATR3P43243 847 aaKnown RBP eCLIP23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 DMTNQ08495 405 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 INTS8Q75QN2 995 aaKnown RBP23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 VPS36Q86VN1 386 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 C12orf56Q8IXR9 622 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 LMO3Q8TAP4 145 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 MS4A14Q96JA4 679 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 GPR88Q9GZN0 384 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 HSPBP1Q9NZL4 362 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 TMOD4Q9NZQ9 345 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 GABBR1Q9UBS5 961 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 SSC5DA1L4H1 1573 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 ZNF862O60290 1169 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 ANXA13P27216 316 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 NCKAP1LP55160 1127 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 CASP8Q14790 479 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 MEI1Q5TIA1 1274 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 TMEM174Q8WUU8 243 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 ZCCHC17Q9NP64 241 aaKnown RBP23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 AFG3L2Q9Y4W6 797 aa23.54■■□□□ 1.36
GRAMD1A-212ENST00000600231 EMSYQ7Z589 1322 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 WDR81Q562E7 1941 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 ATP2A1O14983 1001 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 POLR3GO15318 223 aaPredicted RBP23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 OAS2P29728 719 aaKnown RBP23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 PAFAH1B1P43034 410 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 VAMP7P51809 220 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 PHLDB3Q6NSJ2 640 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 XXYLT1Q8NBI6 393 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 RDM1Q8NG50 284 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 ZBTB9Q96C00 473 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 HINFPQ9BQA5 517 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 SENP7Q9BQF6 1050 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 PPP3CAQ08209 521 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 LRRC1Q9BTT6 524 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 KIFC3Q9BVG8 833 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 ACAD9Q9H845 621 aa23.53■■□□□ 1.36
GRAMD1A-212ENST00000600231 CCDC169A6NNP5 214 aa23.52■■□□□ 1.36
GRAMD1A-212ENST00000600231 SPDYE16A6NNV3 312 aaPredicted RBP23.52■■□□□ 1.36
GRAMD1A-212ENST00000600231 LRRN2O75325 713 aa23.52■■□□□ 1.36
GRAMD1A-212ENST00000600231 MCM3P25205 808 aa23.52■■□□□ 1.36
GRAMD1A-212ENST00000600231 SP4Q02446 784 aa23.52■■□□□ 1.36
GRAMD1A-212ENST00000600231 OLIG1Q8TAK6 271 aa23.52■■□□□ 1.36
GRAMD1A-212ENST00000600231 HDAC7Q8WUI4 952 aa23.52■■□□□ 1.36
GRAMD1A-212ENST00000600231 NOP2P46087 812 aaKnown RBP23.52■■□□□ 1.35
GRAMD1A-212ENST00000600231 ARHGAP44Q17R89 818 aa23.52■■□□□ 1.35
GRAMD1A-212ENST00000600231 DLK2Q6UY11 383 aa23.52■■□□□ 1.35
GRAMD1A-212ENST00000600231 LNX1Q8TBB1 728 aaPredicted RBP23.52■■□□□ 1.35
GRAMD1A-212ENST00000600231 PLEKHO2Q8TD55 490 aa23.52■■□□□ 1.35
GRAMD1A-212ENST00000600231 U2AF1L4Q8WU68 220 aaKnown RBP23.52■■□□□ 1.35
GRAMD1A-212ENST00000600231 HOXC10Q9NYD6 342 aa23.52■■□□□ 1.35
GRAMD1A-212ENST00000600231 NPTX2P47972 431 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 GCLMP48507 274 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 SOX10P56693 466 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 MRPS25P82663 173 aaKnown RBP23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 C1orf220Q5T0J3 134 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 SWSAP1Q6NVH7 229 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 GLYCTKQ8IVS8 523 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 GPC2Q8N158 579 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 TMEM161BQ8NDZ6 487 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 CEP170P1Q96L14 293 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 GOLPH3Q9H4A6 298 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 PDE11AQ9HCR9 933 aa23.51■■□□□ 1.35
GRAMD1A-212ENST00000600231 DOCK5Q9H7D0 1870 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms