RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SPRYD3Q8NCJ5 442 aa31.33■■■□□ 2.61
SSBP4-206ENST00000599699 POLR3FQ9H1D9 316 aaPredicted RBP31.33■■■□□ 2.61
SSBP4-206ENST00000599699 IFT122Q9HBG6 1241 aa31.33■■■□□ 2.61
SSBP4-206ENST00000599699 MYO9BQ13459 2157 aa31.33■■■□□ 2.61
SSBP4-206ENST00000599699 CHD7Q9P2D1 2997 aa31.32■■■□□ 2.61
SSBP4-206ENST00000599699 TTC3P53804 2025 aa31.32■■■□□ 2.61
SSBP4-206ENST00000599699 ADGRA3Q8IWK6 1321 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 EPOPA6NHQ4 379 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 C9IYK1 514 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 DGKIO75912 1065 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 PHKA2P46019 1235 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 ERVK-21P61565 698 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 BTG3Q14201 252 aaPredicted RBP31.32■■■□□ 2.6
SSBP4-206ENST00000599699 SRGAP1Q7Z6B7 1085 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 MCPH1Q8NEM0 835 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 MAFAQ8NHW3 353 aaPredicted RBP31.32■■■□□ 2.6
SSBP4-206ENST00000599699 C17orf80Q9BSJ5 609 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 BHMT2Q9H2M3 363 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 DNM3Q9UQ16 869 aa31.32■■■□□ 2.6
SSBP4-206ENST00000599699 ADGRE1Q14246 886 aa31.31■■■□□ 2.6
SSBP4-206ENST00000599699 FAM102BQ5T8I3 360 aa31.31■■■□□ 2.6
SSBP4-206ENST00000599699 FAM173BQ6P4H8 233 aa31.31■■■□□ 2.6
SSBP4-206ENST00000599699 ASAP3Q8TDY4 903 aa31.31■■■□□ 2.6
SSBP4-206ENST00000599699 ZSCAN16Q9H4T2 348 aaPredicted RBP31.31■■■□□ 2.6
SSBP4-206ENST00000599699 PIN4Q9Y237 131 aaKnown RBP31.31■■■□□ 2.6
SSBP4-206ENST00000599699 ARL2P36404 184 aa31.3■■■□□ 2.6
SSBP4-206ENST00000599699 PAN2Q504Q3 1202 aaKnown RBP31.3■■■□□ 2.6
SSBP4-206ENST00000599699 CRIPAKQ8N1N5 446 aa31.3■■■□□ 2.6
SSBP4-206ENST00000599699 ZNF689Q96CS4 500 aaPredicted RBP31.3■■■□□ 2.6
SSBP4-206ENST00000599699 MMTAG2Q9BU76 263 aaKnown RBP31.3■■■□□ 2.6
SSBP4-206ENST00000599699 GPRC5CQ9NQ84 441 aa31.3■■■□□ 2.6
SSBP4-206ENST00000599699 CHST12Q9NRB3 414 aa31.3■■■□□ 2.6
SSBP4-206ENST00000599699 DACT1Q9NYF0 836 aa31.3■■■□□ 2.6
SSBP4-206ENST00000599699 CLIC4Q9Y696 253 aa31.3■■■□□ 2.6
SSBP4-206ENST00000599699 RNF169Q8NCN4 708 aa31.29■■■□□ 2.6
SSBP4-206ENST00000599699 FBXO22Q8NEZ5 403 aa31.29■■■□□ 2.6
SSBP4-206ENST00000599699 CDK5RAP3Q96JB5 506 aa31.29■■■□□ 2.6
SSBP4-206ENST00000599699 TMEM161AQ9NX61 479 aa31.29■■■□□ 2.6
SSBP4-206ENST00000599699 E9PMD0 336 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 CYP11B2P19099 503 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 GLRA2P23416 452 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 GATMP50440 423 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 FAM189BP81408 668 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 CEBPZQ03701 1054 aaKnown RBP31.28■■■□□ 2.6
SSBP4-206ENST00000599699 CAPSQ13938 189 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 TWF2Q6IBS0 349 aaKnown RBP31.28■■■□□ 2.6
SSBP4-206ENST00000599699 GDPD5Q8WTR4 605 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 SAMD11Q96NU1 681 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 MINDY3Q9H8M7 445 aa31.28■■■□□ 2.6
SSBP4-206ENST00000599699 RC3H2Q9HBD1 1191 aaKnown RBP31.28■■■□□ 2.6
SSBP4-206ENST00000599699 GTPBP6O43824 516 aaPredicted RBP31.27■■■□□ 2.6
SSBP4-206ENST00000599699 TMEM192Q8IY95 271 aa31.27■■■□□ 2.6
SSBP4-206ENST00000599699 CMTR2Q8IYT2 770 aaKnown RBP31.27■■■□□ 2.6
SSBP4-206ENST00000599699 AK8Q96MA6 479 aa31.27■■■□□ 2.6
SSBP4-206ENST00000599699 PLIN2Q99541 437 aa31.27■■■□□ 2.6
SSBP4-206ENST00000599699 ELAC1Q9H777 363 aaKnown RBP31.27■■■□□ 2.6
SSBP4-206ENST00000599699 INO80B-WBP1J3KQ70 363 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 ERLIN2O94905 339 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 EYA4O95677 639 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 PTENP60484 403 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 GRB10Q13322 594 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 EPC2Q52LR7 807 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 FOXD4L5Q5VV16 416 aaPredicted RBP31.26■■■□□ 2.59
SSBP4-206ENST00000599699 CABP7Q86V35 215 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 ECHDC2Q86YB7 292 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 MICALL1Q8N3F8 863 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 FOXD4L4Q8WXT5 416 aaPredicted RBP31.26■■■□□ 2.59
SSBP4-206ENST00000599699 PPM1EQ8WY54 764 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 NT5C3AQ9H0P0 336 aa31.26■■■□□ 2.59
SSBP4-206ENST00000599699 COL6A3P12111 3177 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 LRRIQ4A6NIV6 560 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 TBKBP1A7MCY6 615 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 FGFR1P11362 822 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 CTNNB1P35222 781 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 UBA7P41226 1012 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 POU5F1BQ06416 359 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 AGPAT5Q9NUQ2 364 aa31.25■■■□□ 2.59
SSBP4-206ENST00000599699 A0A0U1RQF3 1178 aa31.24■■■□□ 2.59
SSBP4-206ENST00000599699 MARCKSP29966 332 aaPredicted RBP31.24■■■□□ 2.59
SSBP4-206ENST00000599699 LONP1P36776 959 aaKnown RBP31.24■■■□□ 2.59
SSBP4-206ENST00000599699 NCBP1Q09161 790 aaKnown RBP31.24■■■□□ 2.59
SSBP4-206ENST00000599699 RWDD3Q9Y3V2 267 aa31.24■■■□□ 2.59
SSBP4-206ENST00000599699 COL4A6Q14031 1691 aa31.24■■■□□ 2.59
SSBP4-206ENST00000599699 HOXA2O43364 376 aa31.23■■■□□ 2.59
SSBP4-206ENST00000599699 SSBP05455 408 aaKnown RBP eCLIP31.23■■■□□ 2.59
SSBP4-206ENST00000599699 PDIA4P13667 645 aaKnown RBP31.23■■■□□ 2.59
SSBP4-206ENST00000599699 CCDC85BQ15834 202 aaPredicted RBP31.23■■■□□ 2.59
SSBP4-206ENST00000599699 KCNK18Q7Z418 384 aa31.23■■■□□ 2.59
SSBP4-206ENST00000599699 RASSF8Q8NHQ8 419 aa31.23■■■□□ 2.59
SSBP4-206ENST00000599699 CALML4Q96GE6 196 aa31.23■■■□□ 2.59
SSBP4-206ENST00000599699 PNMA5Q96PV4 448 aa31.23■■■□□ 2.59
SSBP4-206ENST00000599699 POLD4Q9HCU8 107 aa31.23■■■□□ 2.59
SSBP4-206ENST00000599699 MRPL42Q9Y6G3 142 aaKnown RBP31.23■■■□□ 2.59
SSBP4-206ENST00000599699 SKIP12755 728 aa31.22■■■□□ 2.59
SSBP4-206ENST00000599699 GRIN1Q05586 938 aa31.22■■■□□ 2.59
SSBP4-206ENST00000599699 PTPAQ15257 358 aa31.22■■■□□ 2.59
SSBP4-206ENST00000599699 PCBP1Q15365 356 aaKnown RBP eCLIP31.22■■■□□ 2.592e-10■■■■□ 20.9
SSBP4-206ENST00000599699 HYIQ5T013 277 aa31.22■■■□□ 2.59
SSBP4-206ENST00000599699 IFNLR1Q8IU57 520 aaPredicted RBP31.22■■■□□ 2.59
SSBP4-206ENST00000599699 ABI1Q8IZP0 508 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms