RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PDE12Q6L8Q7 609 aaKnown RBP21■□□□□ 0.95
PNKP-213ENST00000599543 RHPN2Q8IUC4 686 aa21■□□□□ 0.95
PNKP-213ENST00000599543 MSLNLQ96KJ4 702 aa21■□□□□ 0.95
PNKP-213ENST00000599543 CEP89Q96ST8 783 aa21■□□□□ 0.95
PNKP-213ENST00000599543 JPH2Q9BR39 696 aaPredicted RBP21■□□□□ 0.95
PNKP-213ENST00000599543 RNF19AQ9NV58 838 aa21■□□□□ 0.95
PNKP-213ENST00000599543 SUCLA2Q9P2R7 463 aaPredicted RBP21■□□□□ 0.95
PNKP-213ENST00000599543 PUF60Q9UHX1 559 aaKnown RBP21■□□□□ 0.95
PNKP-213ENST00000599543 VAV3Q9UKW4 847 aa21■□□□□ 0.95
PNKP-213ENST00000599543 LZTS1Q9Y250 596 aa21■□□□□ 0.95
PNKP-213ENST00000599543 ARID2Q68CP9 1835 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 A0A087WZ62 844 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 EML1O00423 815 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 DCXO43602 365 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 MARCH6O60337 910 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 DKC1O60832 514 aaKnown RBP eCLIP20.99■□□□□ 0.95
PNKP-213ENST00000599543 MAFO75444 373 aaPredicted RBP20.99■□□□□ 0.95
PNKP-213ENST00000599543 EOMESO95936 686 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 QARSP47897 775 aaKnown RBP20.99■□□□□ 0.95
PNKP-213ENST00000599543 COASYQ13057 564 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 PLA2G4FQ68DD2 849 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 LRRC55Q6ZSA7 311 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 ANO5Q75V66 913 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 ZNF410Q86VK4 478 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 SMRP1Q8NCR6 262 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 OXER1Q8TDS5 423 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 MRPS27Q92552 414 aaKnown RBP20.99■□□□□ 0.95
PNKP-213ENST00000599543 ZNF558Q96NG5 402 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 FDXACB1Q9BRP7 624 aaPredicted RBP20.99■□□□□ 0.95
PNKP-213ENST00000599543 INO80BQ9C086 356 aaPredicted RBP20.99■□□□□ 0.95
PNKP-213ENST00000599543 CYP26B1Q9NR63 512 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 CHST12Q9NRB3 414 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 GJB4Q9NTQ9 266 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 CLEC1BQ9P126 229 aa20.99■□□□□ 0.95
PNKP-213ENST00000599543 ORC3Q9UBD5 711 aaPredicted RBP20.99■□□□□ 0.95
PNKP-213ENST00000599543 BARX2Q9UMQ3 279 aaPredicted RBP20.99■□□□□ 0.95
PNKP-213ENST00000599543 PER2O15055 1255 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 TBX3O15119 743 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 CTDNEP1O95476 244 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 EYA4O95677 639 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 GLP2RO95838 553 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 ERVFC1P60507 584 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 PLCB3Q01970 1234 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 ST3GAL1Q11201 340 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 CLLU1OSQ5K130 101 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 PLPP4Q5VZY2 271 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 KCNT2Q6UVM3 1135 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 HELQQ8TDG4 1101 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 SLC7A3Q8WY07 619 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 NLRP4Q96MN2 994 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 CDCA3Q99618 268 aaPredicted RBP20.98■□□□□ 0.95
PNKP-213ENST00000599543 TCF25Q9BQ70 676 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 MRPL9Q9BYD2 267 aaKnown RBP20.98■□□□□ 0.95
PNKP-213ENST00000599543 BRMS1Q9HCU9 246 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 ENTPD7Q9NQZ7 604 aa20.98■□□□□ 0.95
PNKP-213ENST00000599543 PRR33A8MZF0 331 aa20.97■□□□□ 0.95
PNKP-213ENST00000599543 FSCN2O14926 492 aa20.97■□□□□ 0.95
PNKP-213ENST00000599543 SRGAP2BP0DMP2 458 aa20.97■□□□□ 0.95
PNKP-213ENST00000599543 PBX3P40426 434 aa20.97■□□□□ 0.95
PNKP-213ENST00000599543 POLGP54098 1239 aaPredicted RBP20.97■□□□□ 0.95
PNKP-213ENST00000599543 KRT17Q04695 432 aa20.97■□□□□ 0.95
PNKP-213ENST00000599543 TWF2Q6IBS0 349 aaKnown RBP20.97■□□□□ 0.95
PNKP-213ENST00000599543 POTEDQ86YR6 584 aa20.97■□□□□ 0.95
PNKP-213ENST00000599543 PIN4Q9Y237 131 aaKnown RBP20.97■□□□□ 0.95
PNKP-213ENST00000599543 CD2BP2O95400 341 aaKnown RBP20.96■□□□□ 0.95
PNKP-213ENST00000599543 P4HBP07237 508 aaKnown RBP20.96■□□□□ 0.95
PNKP-213ENST00000599543 ATF7P17544 494 aaPredicted RBP20.96■□□□□ 0.95
PNKP-213ENST00000599543 KRT2P35908 639 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 PLA2G5P39877 138 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 PHKA2P46019 1235 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 FOSBP53539 338 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 RABEP1Q15276 862 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 DUSP6Q16828 381 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 ZNF598Q86UK7 904 aaKnown RBP20.96■□□□□ 0.95
PNKP-213ENST00000599543 EXOC8Q8IYI6 725 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 SLFN12Q8IYM2 578 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 HAS1Q92839 578 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 GTF3C6Q969F1 213 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 FAM122AQ96E09 287 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 CEP170P1Q96L14 293 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 LXNQ9BS40 222 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 SPG21Q9NZD8 308 aa20.96■□□□□ 0.95
PNKP-213ENST00000599543 BAG4O95429 457 aaKnown RBP20.95■□□□□ 0.94
PNKP-213ENST00000599543 SKIP12755 728 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 NPEPPSP55786 919 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 NCAPH2Q6IBW4 605 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 CATSPER4Q7RTX7 472 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 KSR1Q8IVT5 923 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 CCDC83Q8IWF9 413 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 RSPH1Q8WYR4 309 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 TRAIPQ9BWF2 469 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 NGRNQ9NPE2 291 aaKnown RBP20.95■□□□□ 0.94
PNKP-213ENST00000599543 LIMCH1Q9UPQ0 1083 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 USP15Q9Y4E8 981 aaPredicted RBP20.95■□□□□ 0.94
PNKP-213ENST00000599543 PPME1Q9Y570 386 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 COL4A3BPQ9Y5P4 624 aa20.95■□□□□ 0.94
PNKP-213ENST00000599543 MUC6Q6W4X9 2439 aa20.94■□□□□ 0.94
PNKP-213ENST00000599543 JAK2O60674 1132 aa20.94■□□□□ 0.94
PNKP-213ENST00000599543 YWHABP31946 246 aaKnown RBP20.94■□□□□ 0.94
PNKP-213ENST00000599543 RFC5P40937 340 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms