RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 RNF169Q8NCN4 708 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 ATXN2LQ8WWM7 1075 aaKnown RBP25.19■■□□□ 1.62
CCDC9-204ENST00000599398 MRPL38Q96DV4 380 aaKnown RBP25.19■■□□□ 1.62
CCDC9-204ENST00000599398 ELAC1Q9H777 363 aaKnown RBP25.19■■□□□ 1.62
CCDC9-204ENST00000599398 TUFT1Q9NNX1 390 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 DACT1Q9NYF0 836 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 PCDHB6Q9Y5E3 794 aa25.19■■□□□ 1.62
CCDC9-204ENST00000599398 CUL9Q8IWT3 2517 aa25.18■■□□□ 1.62
CCDC9-204ENST00000599398 SPATA31C1P0DKV0 1188 aa25.18■■□□□ 1.62
CCDC9-204ENST00000599398 FGFR1P11362 822 aa25.18■■□□□ 1.62
CCDC9-204ENST00000599398 SPOUT1Q5T280 376 aaKnown RBP25.18■■□□□ 1.62
CCDC9-204ENST00000599398 CATSPER3Q86XQ3 398 aa25.18■■□□□ 1.62
CCDC9-204ENST00000599398 MED24O75448 989 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 DGAT1O75907 488 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 RARRES1P49788 294 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 PTGDRQ13258 359 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 FERMT3Q86UX7 667 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 ECHDC2Q86YB7 292 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 C4orf32Q8N8J7 132 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 POLR3CQ9BUI4 534 aaPredicted RBP25.17■■□□□ 1.62
CCDC9-204ENST00000599398 PLVAPQ9BX97 442 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 IFT122Q9HBG6 1241 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 XPNPEP1Q9NQW7 623 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 CHST12Q9NRB3 414 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 PIN4Q9Y237 131 aaKnown RBP25.17■■□□□ 1.62
CCDC9-204ENST00000599398 GTF3C3Q9Y5Q9 886 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 VCANP13611 3396 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 BRWD1Q9NSI6 2320 aa25.17■■□□□ 1.62
CCDC9-204ENST00000599398 ASAP2O43150 1006 aa25.16■■□□□ 1.62
CCDC9-204ENST00000599398 HOXA2O43364 376 aa25.16■■□□□ 1.62
CCDC9-204ENST00000599398 MRPS5P82675 430 aaKnown RBP25.16■■□□□ 1.62
CCDC9-204ENST00000599398 TJAP1Q5JTD0 557 aa25.16■■□□□ 1.62
CCDC9-204ENST00000599398 TWF2Q6IBS0 349 aaKnown RBP25.16■■□□□ 1.62
CCDC9-204ENST00000599398 ABI1Q8IZP0 508 aa25.16■■□□□ 1.62
CCDC9-204ENST00000599398 RNF149Q8NC42 400 aa25.16■■□□□ 1.62
CCDC9-204ENST00000599398 GRM6O15303 877 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 USO1O60763 962 aaKnown RBP25.15■■□□□ 1.62
CCDC9-204ENST00000599398 CSPG5O95196 566 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 XRCC6P12956 609 aaKnown RBP eCLIP25.15■■□□□ 1.62
CCDC9-204ENST00000599398 FXR2P51116 673 aaKnown RBP eCLIP25.15■■□□□ 1.62
CCDC9-204ENST00000599398 MXD4Q14582 209 aaPredicted RBP25.15■■□□□ 1.62
CCDC9-204ENST00000599398 TIGD5Q53EQ6 642 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 LARP1BQ659C4 914 aaKnown RBP25.15■■□□□ 1.62
CCDC9-204ENST00000599398 HAUS3Q68CZ6 603 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 POTEGQ6S5H5 508 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 SRGAP1Q7Z6B7 1085 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 NACC1Q96RE7 527 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 COL25A1Q9BXS0 654 aaPredicted RBP25.15■■□□□ 1.62
CCDC9-204ENST00000599398 ALG13Q9NP73 1137 aaKnown RBP25.15■■□□□ 1.62
CCDC9-204ENST00000599398 LRWD1Q9UFC0 647 aa25.15■■□□□ 1.62
CCDC9-204ENST00000599398 A0A0U1RQF3 1178 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 RPA1P27694 616 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 PHKA2P46019 1235 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 TFF2Q03403 129 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 RILPL1Q5EBL4 403 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 HLA-CQ95604 372 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 ASB2Q96Q27 587 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 RAB34Q9BZG1 259 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 TMEM117Q9H0C3 514 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 TYW1Q9NV66 732 aaKnown RBP25.14■■□□□ 1.62
CCDC9-204ENST00000599398 COG5Q9UP83 839 aa25.14■■□□□ 1.62
CCDC9-204ENST00000599398 CCT6AP40227 531 aaKnown RBP25.13■■□□□ 1.61
CCDC9-204ENST00000599398 TFDP1Q14186 410 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 KLHL23Q8NBE8 558 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 P2RX5Q93086 422 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 LMAN2LQ9H0V9 348 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 MINDY3Q9H8M7 445 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.13■■□□□ 1.61
CCDC9-204ENST00000599398 AAASQ9NRG9 546 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 HCSTQ9UBK5 93 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 PLAGL2Q9UPG8 496 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 PCDHB12Q9Y5F1 795 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 XIRP2A4UGR9 3374 aa25.13■■□□□ 1.61
CCDC9-204ENST00000599398 SPTBN5Q9NRC6 3674 aaKnown RBP25.12■■□□□ 1.61
CCDC9-204ENST00000599398 LAD1O00515 517 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 EOMESO95936 686 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 AAK1Q2M2I8 961 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 NAALADL2Q58DX5 795 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 MAEAQ7L5Y9 396 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 ASAP3Q8TDY4 903 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 SYMPKQ92797 1274 aaKnown RBP25.12■■□□□ 1.61
CCDC9-204ENST00000599398 POLR3FQ9H1D9 316 aaPredicted RBP25.12■■□□□ 1.61
CCDC9-204ENST00000599398 AGPAT5Q9NUQ2 364 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 RNF19AQ9NV58 838 aa25.12■■□□□ 1.61
CCDC9-204ENST00000599398 DBR1Q9UK59 544 aaKnown RBP25.12■■□□□ 1.61
CCDC9-204ENST00000599398 ARHGEF35A5YM69 484 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 ERLIN2O94905 339 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 ITGB1P05556 798 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 SKIP12755 728 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 CUL4AQ13619 759 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 PDIA5Q14554 519 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 HELQQ8TDG4 1101 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 CASD1Q96PB1 797 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 NSUN3Q9H649 340 aaKnown RBP25.11■■□□□ 1.61
CCDC9-204ENST00000599398 ATG2AQ2TAZ0 1938 aa25.11■■□□□ 1.61
CCDC9-204ENST00000599398 ATF7P17544 494 aaPredicted RBP25.1■■□□□ 1.61
CCDC9-204ENST00000599398 ARL2P36404 184 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 CAPSQ13938 189 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 LONRF3Q496Y0 759 aa25.1■■□□□ 1.61
CCDC9-204ENST00000599398 TCEAL5Q5H9L2 206 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms