RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 GPRC5CQ9NQ84 441 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 DDX19AQ9NUU7 478 aaKnown RBP25.37■■□□□ 1.65
IRF3-220ENST00000598108 PCDHB7Q9Y5E2 793 aa25.37■■□□□ 1.65
IRF3-220ENST00000598108 STX6O43752 255 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 LPXNO60711 386 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 LINC00271P0C7V0 271 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 STAG3L1P0CL83 205 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 KRT79Q5XKE5 535 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 PADI6Q6TGC4 694 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 MAFAQ8NHW3 353 aaPredicted RBP25.36■■□□□ 1.65
IRF3-220ENST00000598108 INO80BQ9C086 356 aaPredicted RBP25.36■■□□□ 1.65
IRF3-220ENST00000598108 LRFN2Q9ULH4 789 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 CLIC4Q9Y696 253 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 STK24Q9Y6E0 443 aa25.36■■□□□ 1.65
IRF3-220ENST00000598108 LOXHD1Q8IVV2 1947 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 ARHGEF35A5YM69 484 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 ZSCAN20P17040 1043 aaPredicted RBP25.35■■□□□ 1.65
IRF3-220ENST00000598108 SFPQP23246 707 aaKnown RBP eCLIP25.35■■□□□ 1.65
IRF3-220ENST00000598108 GLRA2P23416 452 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 GRB10Q13322 594 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 MXD4Q14582 209 aaPredicted RBP25.35■■□□□ 1.65
IRF3-220ENST00000598108 FAM102BQ5T8I3 360 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 SRGAP1Q7Z6B7 1085 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 FIBCD1Q8N539 461 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 POLR3FQ9H1D9 316 aaPredicted RBP25.35■■□□□ 1.65
IRF3-220ENST00000598108 BHMT2Q9H2M3 363 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 ADGRA3Q8IWK6 1321 aa25.35■■□□□ 1.65
IRF3-220ENST00000598108 CYP11B2P19099 503 aa25.34■■□□□ 1.65
IRF3-220ENST00000598108 GRIN1Q05586 938 aa25.34■■□□□ 1.65
IRF3-220ENST00000598108 CAPSQ13938 189 aa25.34■■□□□ 1.65
IRF3-220ENST00000598108 BTG3Q14201 252 aaPredicted RBP25.34■■□□□ 1.65
IRF3-220ENST00000598108 CATSPER4Q7RTX7 472 aa25.34■■□□□ 1.65
IRF3-220ENST00000598108 KCNK18Q7Z418 384 aa25.34■■□□□ 1.65
IRF3-220ENST00000598108 GDPD5Q8WTR4 605 aa25.34■■□□□ 1.65
IRF3-220ENST00000598108 POLD4Q9HCU8 107 aa25.34■■□□□ 1.65
IRF3-220ENST00000598108 E9PMD0 336 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 PTENP60484 403 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 PTPAQ15257 358 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 PAN2Q504Q3 1202 aaKnown RBP25.33■■□□□ 1.65
IRF3-220ENST00000598108 EPC2Q52LR7 807 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 ECHDC2Q86YB7 292 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 TMEM192Q8IY95 271 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 SPRYD3Q8NCJ5 442 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 PNMA5Q96PV4 448 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 ELAC1Q9H777 363 aaKnown RBP25.33■■□□□ 1.65
IRF3-220ENST00000598108 CHST12Q9NRB3 414 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 RNF19AQ9NV58 838 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 TMEM161AQ9NX61 479 aa25.33■■□□□ 1.65
IRF3-220ENST00000598108 A0A0U1RQF3 1178 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 BMP15O95972 392 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 FGFR1P11362 822 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 HOXA11P31270 313 aaPredicted RBP25.32■■□□□ 1.64
IRF3-220ENST00000598108 ZRSR1Q15695 479 aaKnown RBP25.32■■□□□ 1.64
IRF3-220ENST00000598108 CMTR2Q8IYT2 770 aaKnown RBP25.32■■□□□ 1.64
IRF3-220ENST00000598108 MCPH1Q8NEM0 835 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 PLIN2Q99541 437 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 DNM3Q9UQ16 869 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 PIN4Q9Y237 131 aaKnown RBP25.32■■□□□ 1.64
IRF3-220ENST00000598108 MTCH2Q9Y6C9 303 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 MRPL42Q9Y6G3 142 aaKnown RBP25.32■■□□□ 1.64
IRF3-220ENST00000598108 COL4A6Q14031 1691 aa25.32■■□□□ 1.64
IRF3-220ENST00000598108 PRUNE2Q8WUY3 3088 aa25.31■■□□□ 1.64
IRF3-220ENST00000598108 EYA4O95677 639 aa25.31■■□□□ 1.64
IRF3-220ENST00000598108 POU3F3P20264 500 aaPredicted RBP25.31■■□□□ 1.64
IRF3-220ENST00000598108 PHKA2P46019 1235 aa25.31■■□□□ 1.64
IRF3-220ENST00000598108 POU5F1BQ06416 359 aa25.31■■□□□ 1.64
IRF3-220ENST00000598108 HYIQ5T013 277 aa25.31■■□□□ 1.64
IRF3-220ENST00000598108 ZNF598Q86UK7 904 aaKnown RBP25.31■■□□□ 1.64
IRF3-220ENST00000598108 IFNLR1Q8IU57 520 aaPredicted RBP25.31■■□□□ 1.64
IRF3-220ENST00000598108 FBXO22Q8NEZ5 403 aa25.31■■□□□ 1.64
IRF3-220ENST00000598108 BSNDQ8WZ55 320 aa25.31■■□□□ 1.64
IRF3-220ENST00000598108 CLP1Q92989 425 aaKnown RBP25.31■■□□□ 1.64
IRF3-220ENST00000598108 HSP90AA1P07900 732 aaKnown RBP25.3■■□□□ 1.64
IRF3-220ENST00000598108 ATF7P17544 494 aaPredicted RBP25.3■■□□□ 1.64
IRF3-220ENST00000598108 BMPR1AP36894 532 aa25.3■■□□□ 1.64
IRF3-220ENST00000598108 TFDP1Q14186 410 aa25.3■■□□□ 1.64
IRF3-220ENST00000598108 CCDC85BQ15834 202 aaPredicted RBP25.3■■□□□ 1.64
IRF3-220ENST00000598108 PPM1EQ8WY54 764 aa25.3■■□□□ 1.64
IRF3-220ENST00000598108 SAMD11Q96NU1 681 aa25.3■■□□□ 1.64
IRF3-220ENST00000598108 ZSCAN16Q9H4T2 348 aaPredicted RBP25.3■■□□□ 1.64
IRF3-220ENST00000598108 AGPAT5Q9NUQ2 364 aa25.3■■□□□ 1.64
IRF3-220ENST00000598108 DACT1Q9NYF0 836 aa25.3■■□□□ 1.64
IRF3-220ENST00000598108 TBKBP1A7MCY6 615 aa25.29■■□□□ 1.64
IRF3-220ENST00000598108 CEBPZQ03701 1054 aaKnown RBP25.29■■□□□ 1.64
IRF3-220ENST00000598108 MBTD1Q05BQ5 628 aa25.29■■□□□ 1.64
IRF3-220ENST00000598108 TWF2Q6IBS0 349 aaKnown RBP25.29■■□□□ 1.64
IRF3-220ENST00000598108 RNF169Q8NCN4 708 aa25.29■■□□□ 1.64
IRF3-220ENST00000598108 AK8Q96MA6 479 aa25.29■■□□□ 1.64
IRF3-220ENST00000598108 TRAIPQ9BWF2 469 aa25.29■■□□□ 1.64
IRF3-220ENST00000598108 RNF216Q9NWF9 866 aaPredicted RBP25.29■■□□□ 1.64
IRF3-220ENST00000598108 TRANK1O15050 2925 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 INO80B-WBP1J3KQ70 363 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 MARCKSP29966 332 aaPredicted RBP25.28■■□□□ 1.64
IRF3-220ENST00000598108 CTNNB1P35222 781 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 AMHR2Q16671 573 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 FOXD4L5Q5VV16 416 aaPredicted RBP25.28■■□□□ 1.64
IRF3-220ENST00000598108 CABP7Q86V35 215 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 FOXD4L4Q8WXT5 416 aaPredicted RBP25.28■■□□□ 1.64
IRF3-220ENST00000598108 CASD1Q96PB1 797 aa25.28■■□□□ 1.64
IRF3-220ENST00000598108 USP28Q96RU2 1077 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms