RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PCDHB7Q9Y5E2 793 aa23.47■■□□□ 1.35
PNKP-209ENST00000596726 REV3LO60673 3130 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 SRGAP2CP0DJJ0 459 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 ZSCAN20P17040 1043 aaPredicted RBP23.46■■□□□ 1.35
PNKP-209ENST00000596726 IGFBP4P22692 258 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 SFPQP23246 707 aaKnown RBP eCLIP23.46■■□□□ 1.35
PNKP-209ENST00000596726 GRB10Q13322 594 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 MXD4Q14582 209 aaPredicted RBP23.46■■□□□ 1.35
PNKP-209ENST00000596726 PRRC2BQ5JSZ5 2229 aaKnown RBP23.46■■□□□ 1.35
PNKP-209ENST00000596726 SRGAP1Q7Z6B7 1085 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 CMTR2Q8IYT2 770 aaKnown RBP23.46■■□□□ 1.35
PNKP-209ENST00000596726 SNX29Q8TEQ0 813 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 CLP1Q92989 425 aaKnown RBP23.46■■□□□ 1.35
PNKP-209ENST00000596726 MMTAG2Q9BU76 263 aaKnown RBP23.46■■□□□ 1.35
PNKP-209ENST00000596726 CHST12Q9NRB3 414 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 TMEM161AQ9NX61 479 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 MTUS1Q9ULD2 1270 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 LRFN2Q9ULH4 789 aa23.46■■□□□ 1.35
PNKP-209ENST00000596726 KIAA1671Q9BY89 1806 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 PP2D1A8MPX8 630 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 USO1O60763 962 aaKnown RBP23.45■■□□□ 1.34
PNKP-209ENST00000596726 POU5F1BQ06416 359 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 RESTQ13127 1097 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 BTG3Q14201 252 aaPredicted RBP23.45■■□□□ 1.34
PNKP-209ENST00000596726 EPC2Q52LR7 807 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 HSCBQ8IWL3 235 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 RNF149Q8NC42 400 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 ASAP3Q8TDY4 903 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 MINDY3Q9H8M7 445 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 MTMR6Q9Y217 621 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 MTCH2Q9Y6C9 303 aa23.45■■□□□ 1.34
PNKP-209ENST00000596726 CDC25AP30304 524 aa23.44■■□□□ 1.34
PNKP-209ENST00000596726 KRT79Q5XKE5 535 aa23.44■■□□□ 1.34
PNKP-209ENST00000596726 IFNLR1Q8IU57 520 aaPredicted RBP23.44■■□□□ 1.34
PNKP-209ENST00000596726 TMEM192Q8IY95 271 aa23.44■■□□□ 1.34
PNKP-209ENST00000596726 MCPH1Q8NEM0 835 aa23.44■■□□□ 1.34
PNKP-209ENST00000596726 FBXO22Q8NEZ5 403 aa23.44■■□□□ 1.34
PNKP-209ENST00000596726 TRAIPQ9BWF2 469 aa23.44■■□□□ 1.34
PNKP-209ENST00000596726 DDX19AQ9NUU7 478 aaKnown RBP23.44■■□□□ 1.34
PNKP-209ENST00000596726 KIAA1024Q9UPX6 916 aa23.44■■□□□ 1.34
PNKP-209ENST00000596726 A0A0U1RQF3 1178 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 BMP15O95972 392 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 CYP11B2P19099 503 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 GLRA2P23416 452 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 GATMP50440 423 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 PTENP60484 403 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 FAM102BQ5T8I3 360 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 PADI6Q6TGC4 694 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 CATSPER4Q7RTX7 472 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 ECHDC2Q86YB7 292 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 GDPD5Q8WTR4 605 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 DACT1Q9NYF0 836 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 LMCD1Q9NZU5 365 aa23.43■■□□□ 1.34
PNKP-209ENST00000596726 ARHGEF35A5YM69 484 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 VWA3AA6NCI4 1184 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 C5orf67F2Z3F1 127 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 STX6O43752 255 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 IBSPP21815 317 aaPredicted RBP23.42■■□□□ 1.34
PNKP-209ENST00000596726 PHKA2P46019 1235 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 CAPSQ13938 189 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 TFDP1Q14186 410 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 SF3A1Q15459 793 aaKnown RBP23.42■■□□□ 1.34
PNKP-209ENST00000596726 HYIQ5T013 277 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 ZNF598Q86UK7 904 aaKnown RBP23.42■■□□□ 1.34
PNKP-209ENST00000596726 NFKBIZQ9BYH8 718 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 POLR3FQ9H1D9 316 aaPredicted RBP23.42■■□□□ 1.34
PNKP-209ENST00000596726 GPRC5CQ9NQ84 441 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 AGPAT5Q9NUQ2 364 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 RNF19AQ9NV58 838 aa23.42■■□□□ 1.34
PNKP-209ENST00000596726 H3BNC9 293 aa23.41■■□□□ 1.34
PNKP-209ENST00000596726 GTPBP6O43824 516 aaPredicted RBP23.41■■□□□ 1.34
PNKP-209ENST00000596726 BMPR1AP36894 532 aa23.41■■□□□ 1.34
PNKP-209ENST00000596726 PAN2Q504Q3 1202 aaKnown RBP23.41■■□□□ 1.34
PNKP-209ENST00000596726 BHMT2Q9H2M3 363 aa23.41■■□□□ 1.34
PNKP-209ENST00000596726 PIN4Q9Y237 131 aaKnown RBP23.41■■□□□ 1.34
PNKP-209ENST00000596726 RWDD3Q9Y3V2 267 aa23.41■■□□□ 1.34
PNKP-209ENST00000596726 MRPL42Q9Y6G3 142 aaKnown RBP23.41■■□□□ 1.34
PNKP-209ENST00000596726 EYA4O95677 639 aa23.4■■□□□ 1.34
PNKP-209ENST00000596726 EOMESO95936 686 aa23.4■■□□□ 1.34
PNKP-209ENST00000596726 RB1P06400 928 aa23.4■■□□□ 1.34
PNKP-209ENST00000596726 ATF7P17544 494 aaPredicted RBP23.4■■□□□ 1.34
PNKP-209ENST00000596726 PCBP1Q15365 356 aaKnown RBP eCLIP23.4■■□□□ 1.34
PNKP-209ENST00000596726 MAEAQ7L5Y9 396 aa23.4■■□□□ 1.34
PNKP-209ENST00000596726 AK8Q96MA6 479 aa23.4■■□□□ 1.34
PNKP-209ENST00000596726 DNM3Q9UQ16 869 aa23.4■■□□□ 1.34
PNKP-209ENST00000596726 CLIC4Q9Y696 253 aa23.4■■□□□ 1.34
PNKP-209ENST00000596726 MYH15Q9Y2K3 1946 aa23.39■■□□□ 1.34
PNKP-209ENST00000596726 E9PMD0 336 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 FGFR1P11362 822 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 HOXA11P31270 313 aaPredicted RBP23.39■■□□□ 1.33
PNKP-209ENST00000596726 CTNNB1P35222 781 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 PTPAQ15257 358 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 TWF2Q6IBS0 349 aaKnown RBP23.39■■□□□ 1.33
PNKP-209ENST00000596726 FAM173BQ6P4H8 233 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 KCNK18Q7Z418 384 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 KCTD17Q8N5Z5 321 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 PNMA5Q96PV4 448 aa23.39■■□□□ 1.33
PNKP-209ENST00000596726 ZSCAN16Q9H4T2 348 aaPredicted RBP23.39■■□□□ 1.33
PNKP-209ENST00000596726 TBKBP1A7MCY6 615 aa23.38■■□□□ 1.33
PNKP-209ENST00000596726 HOXA2O43364 376 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms