RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ODF2LQ9ULJ1 636 aa18.58■□□□□ 0.56
SHKBP1-205ENST00000594973 SSC5DA1L4H1 1573 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 MACROD2A1Z1Q3 448 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 C19orf81C9J6K1 198 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 ENC1O14682 589 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 EIF3DO15371 548 aaKnown RBP eCLIP18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 ACTN1P12814 892 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 QARSP47897 775 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 ARID5AQ03989 594 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 TDRD12Q587J7 1177 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 EGFL6Q8IUX8 553 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 DAW1Q8N136 415 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 FAM212AQ96EL1 285 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 GGA2Q9UJY4 613 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 PNMA2Q9UL42 364 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 MYO1FO00160 1098 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 AFPP02771 609 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 SCP2P22307 547 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 CRYMQ14894 314 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 UGCGQ16739 394 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 SUPT20HL1Q3ZLR7 823 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 PAPD7Q5XG87 772 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 C12orf42Q96LP6 360 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 CCDC43Q96MW1 224 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 IFIH1Q9BYX4 1025 aaKnown RBP18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 SEL1LQ9UBV2 794 aa18.57■□□□□ 0.56
SHKBP1-205ENST00000594973 NDUFAB1O14561 156 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 USO1O60763 962 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 ENOX2Q16206 610 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 SAMD3Q8N6K7 520 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 AENQ8WTP8 325 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 SAR1BQ9Y6B6 198 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 CCNE2O96020 404 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 NR3C2P08235 984 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 SLC9A1P19634 815 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 YWHABP31946 246 aaKnown RBP18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 RARRES1P49788 294 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 VAV2P52735 878 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 GFPT1Q06210 699 aaPredicted RBP18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 KIF5AQ12840 1032 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 MAPK7Q13164 816 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 RAPGEF1Q13905 1077 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 SFMBT2Q5VUG0 894 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 CATSPERGQ6ZRH7 1159 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 FMNL3Q8IVF7 1028 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 EDEM3Q9BZQ6 932 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 AFG3L2Q9Y4W6 797 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 PCDHA13Q9Y5I0 950 aa18.56■□□□□ 0.56
SHKBP1-205ENST00000594973 TLR2O60603 784 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 CYP2J2P51589 502 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 DRP2Q13474 957 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 MMS19Q96T76 1030 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 KLC4Q9NSK0 619 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 HDAC6Q9UBN7 1215 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 PPP2R3BQ9Y5P8 575 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 K7ENM7 598 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 SLC16A3O15427 465 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 CCND2P30279 289 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 HGSNATQ68CP4 663 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 IQCEQ6IPM2 695 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 STXBP4Q6ZWJ1 553 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 HS2ST1Q7LGA3 356 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 VSIG10LQ86VR7 867 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 SYCP3Q8IZU3 236 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 MAGEC3Q8TD91 643 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 N4BP2L2Q92802 583 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 SLC35C1Q96A29 364 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 FAXDC2Q96IV6 333 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 TEX13BQ9BXU2 312 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 METTL14Q9HCE5 456 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 ADAMTS5Q9UNA0 930 aa18.55■□□□□ 0.56
SHKBP1-205ENST00000594973 SORBS3O60504 671 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 PEX10O60683 326 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 RASSF9O75901 435 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 VGLL4Q14135 290 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 EXOC3L4Q17RC7 722 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 C11orf91Q3C1V1 193 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 ALS2CLQ60I27 953 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 CCDC70Q6NSX1 233 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 CCDC50Q8IVM0 306 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 FAM186BQ8IYM0 893 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 FAM133AQ8N9E0 248 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 CD248Q9HCU0 757 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 AGPAT3Q9NRZ7 376 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 SPDYE16A6NNV3 312 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 WDR64B1ANS9 1081 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 BACH1O14867 736 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 OAZ1P54368 228 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 SP4Q02446 784 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 ACTN3Q08043 901 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 SLC9C1Q4G0N8 1177 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 PLA2G4FQ68DD2 849 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 NLRX1Q86UT6 975 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 UPF1Q92900 1129 aaKnown RBP eCLIP18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 GANQ9H2C0 597 aa18.54■□□□□ 0.56
SHKBP1-205ENST00000594973 ADM5C9JUS6 153 aa18.53■□□□□ 0.56
SHKBP1-205ENST00000594973 ATP1A1P05023 1023 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms