RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 FGFR1OPO95684 399 aaKnown RBP16.73■□□□□ 0.27
PNKP-204ENST00000594661 LSP1P33241 339 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 KLK7P49862 253 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 RAB27AP51159 221 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 OAZ1P54368 228 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 LRRC63Q05C16 580 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 ITGB3BPQ13352 177 aaPredicted RBP16.73■□□□□ 0.27
PNKP-204ENST00000594661 TTMPQ5BVD1 217 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 KDM7AQ6ZMT4 941 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 KIRREL3Q8IZU9 778 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 CCDC114Q96M63 670 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 GDAP1L1Q96MZ0 367 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 DNAJC7Q99615 494 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 PDCD2LQ9BRP1 358 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 AGO4Q9HCK5 861 aaKnown RBP16.73■□□□□ 0.27
PNKP-204ENST00000594661 JADE2Q9NQC1 790 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 DHX15O43143 795 aaKnown RBP16.73■□□□□ 0.27
PNKP-204ENST00000594661 MYCLP12524 364 aaPredicted RBP16.73■□□□□ 0.27
PNKP-204ENST00000594661 EPHA7Q15375 998 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 ZCWPW2Q504Y3 356 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 TREML2Q5T2D2 321 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 ALS2CLQ60I27 953 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 THOC1Q96FV9 657 aaKnown RBP16.73■□□□□ 0.27
PNKP-204ENST00000594661 TSG101Q99816 390 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 NUP58Q9BVL2 599 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 RPS6KL1Q9Y6S9 549 aa16.73■□□□□ 0.27
PNKP-204ENST00000594661 RSPH10B2B2RC85 870 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 PPP1R12BO60237 982 aaPredicted RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 CAND2O75155 1236 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 RSPH10BP0C881 870 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 IBSPP21815 317 aaPredicted RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 CKAP4Q07065 602 aaKnown RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 MTMR1Q13613 665 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 DRAXINQ8NBI3 349 aaPredicted RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 RETREG2Q8NC44 543 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 L3MBTL3Q96JM7 780 aaPredicted RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 MMS19Q96T76 1030 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 BCAS3Q9H6U6 928 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 POLD4Q9HCU8 107 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 AGPAT5Q9NUQ2 364 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 CSADQ9Y600 493 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 ATP2A1O14983 1001 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 MGRN1O60291 552 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 CASP5P51878 434 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 E2F5Q15329 346 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 PTGISQ16647 500 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 ARHGEF16Q5VV41 709 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 RINT1Q6NUQ1 792 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 MOB2Q70IA6 237 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 SFR1Q86XK3 245 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 NELFCDQ8IXH7 590 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 GSPT2Q8IYD1 628 aaKnown RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 KCTD17Q8N5Z5 321 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 RBM46Q8TBY0 533 aaKnown RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 ZBTB10Q96DT7 871 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 LXNQ9BS40 222 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 TEX13BQ9BXU2 312 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 TTYH3Q9C0H2 523 aa16.72■□□□□ 0.27
PNKP-204ENST00000594661 EPN1Q9Y6I3 576 aaPredicted RBP16.72■□□□□ 0.27
PNKP-204ENST00000594661 RASSF10A6NK89 507 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 CLSTN1O94985 981 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 NDUFA10O95299 355 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 ABL1P00519 1130 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 NEFHP12036 1026 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 XRCC4Q13426 336 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 PLS1Q14651 629 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 VWA3BQ502W6 1294 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 DPY19L2Q6NUT2 758 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 ARL8AQ96BM9 186 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 CDCA5Q96FF9 252 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 CLMNQ96JQ2 1002 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 SCLT1Q96NL6 688 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 ERGIC2Q96RQ1 377 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 ELP3Q9H9T3 547 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 EBF2Q9HAK2 575 aa16.71■□□□□ 0.27
PNKP-204ENST00000594661 PEX10O60683 326 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 EPHX2P34913 555 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 IFT88Q13099 833 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 PAPD7Q5XG87 772 aaKnown RBP16.7■□□□□ 0.26
PNKP-204ENST00000594661 WDR59Q6PJI9 974 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 MIER3Q7Z3K6 550 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 NLRP14Q86W24 1093 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
PNKP-204ENST00000594661 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 PAIP2Q9BPZ3 127 aaKnown RBP16.7■□□□□ 0.26
PNKP-204ENST00000594661 HOXC10Q9NYD6 342 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 COQ9O75208 318 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 FAM107AO95990 144 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 MUTP22033 750 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 IREB2P48200 963 aaKnown RBP16.7■□□□□ 0.26
PNKP-204ENST00000594661 MAN2A1Q16706 1144 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 TBC1D25Q3MII6 688 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 FOXR2Q6PJQ5 311 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 CCDC121Q6ZUS5 278 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 C1orf186Q6ZWK4 172 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms