RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 TMEM161AQ9NX61 479 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 PCDHA4Q9UN74 947 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 KCNJ14Q9UNX9 436 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 HCFC2Q9Y5Z7 792 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 NFASCO94856 1347 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 MAFGO15525 162 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 WEE2P0C1S8 567 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 KLRC1P26715 233 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 DDIT3P35638 169 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 CWF19L1Q69YN2 538 aaKnown RBP17.32■□□□□ 0.36
FOXA3-202ENST00000594297 KCNT2Q6UVM3 1135 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 LRRC55Q6ZSA7 311 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 BRAPQ7Z569 592 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 DIS3L2Q8IYB7 885 aaKnown RBP17.32■□□□□ 0.36
FOXA3-202ENST00000594297 BLIDQ8IZY5 108 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 NECTIN4Q96NY8 510 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 OSMRQ99650 979 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 SDF4Q9BRK5 362 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 NGRNQ9NPE2 291 aaKnown RBP17.32■□□□□ 0.36
FOXA3-202ENST00000594297 RIC8AQ9NPQ8 531 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 PUF60Q9UHX1 559 aaKnown RBP17.32■□□□□ 0.36
FOXA3-202ENST00000594297 PCDHA6Q9UN73 950 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 MTMR6Q9Y217 621 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 PCDHA8Q9Y5H6 950 aa17.32■□□□□ 0.36
FOXA3-202ENST00000594297 EVPLQ92817 2033 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 ID4P47928 161 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
FOXA3-202ENST00000594297 KIZQ2M2Z5 673 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 CES5AQ6NT32 575 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 TMC7Q7Z402 723 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 KIAA0319LQ8IZA0 1049 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 ADSSL1Q8N142 457 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 REXO1Q8N1G1 1221 aaKnown RBP17.31■□□□□ 0.36
FOXA3-202ENST00000594297 LRRC43Q8N309 656 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 TDRD5Q8NAT2 981 aaKnown RBP17.31■□□□□ 0.36
FOXA3-202ENST00000594297 DAGLBQ8NCG7 672 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 CYP2W1Q8TAV3 490 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 ZNF558Q96NG5 402 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 CASD1Q96PB1 797 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 MXRA8Q9BRK3 442 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 TMEM117Q9H0C3 514 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 ADAM7Q9H2U9 754 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 MFSD1Q9H3U5 465 aa17.31■□□□□ 0.36
FOXA3-202ENST00000594297 ELAC1Q9H777 363 aaKnown RBP17.31■□□□□ 0.36
FOXA3-202ENST00000594297 MYO10Q9HD67 2058 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 COL1A2P08123 1366 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 FAM186AA6NE01 2351 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 GPR182O15218 404 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 F13A1P00488 732 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 FOSP01100 380 aaPredicted RBP17.3■□□□□ 0.36
FOXA3-202ENST00000594297 ARP10275 920 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 PPM1AP35813 382 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 ITIH3Q06033 890 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 DSC3Q14574 896 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
FOXA3-202ENST00000594297 ODR4Q5SWX8 454 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 PGBD1Q96JS3 809 aa17.3■□□□□ 0.36
FOXA3-202ENST00000594297 NOL7Q9UMY1 257 aaKnown RBP17.3■□□□□ 0.36
FOXA3-202ENST00000594297 C2orf71A6NGG8 1288 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 ZBTB42B2RXF5 422 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 DDX39AO00148 427 aaKnown RBP17.29■□□□□ 0.36
FOXA3-202ENST00000594297 HBP1O60381 514 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 ATG7O95352 703 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 MTHFRP42898 656 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 SLC26A2P50443 739 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 FAM189BP81408 668 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 RARS2Q5T160 578 aaKnown RBP17.29■□□□□ 0.36
FOXA3-202ENST00000594297 FOXD4L5Q5VV16 416 aaPredicted RBP17.29■□□□□ 0.36
FOXA3-202ENST00000594297 FAM43BQ6ZT52 329 aaPredicted RBP17.29■□□□□ 0.36
FOXA3-202ENST00000594297 KRT25Q7Z3Z0 450 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 CCDC60Q8IWA6 550 aaPredicted RBP17.29■□□□□ 0.36
FOXA3-202ENST00000594297 FOXD4L4Q8WXT5 416 aaPredicted RBP17.29■□□□□ 0.36
FOXA3-202ENST00000594297 AGO4Q9HCK5 861 aaKnown RBP17.29■□□□□ 0.36
FOXA3-202ENST00000594297 GJB4Q9NTQ9 266 aa17.29■□□□□ 0.36
FOXA3-202ENST00000594297 IGKV6D-21A0A0A0MT36 114 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 BTBD18B2RXH4 712 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 BACH1O14867 736 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 CLASP2O75122 1294 aaKnown RBP17.28■□□□□ 0.36
FOXA3-202ENST00000594297 CCNE2O96020 404 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 VTNP04004 478 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 U2AF2P26368 475 aaKnown RBP eCLIP17.28■□□□□ 0.36
FOXA3-202ENST00000594297 CA8P35219 290 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 CLCN5P51795 746 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 CRYBB1P53674 252 aaPredicted RBP17.28■□□□□ 0.36
FOXA3-202ENST00000594297 KRT17Q04695 432 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 FERMT3Q86UX7 667 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 NOSTRINQ8IVI9 506 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 ZDHHC14Q8IZN3 488 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 C12orf76Q8N812 135 aaPredicted RBP17.28■□□□□ 0.36
FOXA3-202ENST00000594297 FEZF2Q8TBJ5 459 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
FOXA3-202ENST00000594297 SPG21Q9NZD8 308 aa17.28■□□□□ 0.36
FOXA3-202ENST00000594297 PTPRZ1P23471 2315 aaPredicted RBP17.28■□□□□ 0.36
FOXA3-202ENST00000594297 CACNA1AO00555 2505 aa17.27■□□□□ 0.36
FOXA3-202ENST00000594297 RIF1Q5UIP0 2472 aaKnown RBP17.27■□□□□ 0.36
FOXA3-202ENST00000594297 HOXA2O43364 376 aa17.27■□□□□ 0.36
FOXA3-202ENST00000594297 C22orf31O95567 290 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms