RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SAGE1Q9NXZ1 904 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
VRK3-207ENST00000594092 ADGRA3Q8IWK6 1321 aa16.69■□□□□ 0.26
VRK3-207ENST00000594092 TEX33O43247 280 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 GAS2O43903 313 aaKnown RBP16.68■□□□□ 0.26
VRK3-207ENST00000594092 NR2F2P24468 414 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 CACNB2Q08289 660 aaPredicted RBP16.68■□□□□ 0.26
VRK3-207ENST00000594092 MKRN4PQ13434 485 aaPredicted RBP16.68■□□□□ 0.26
VRK3-207ENST00000594092 DRP2Q13474 957 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 JPH2Q9BR39 696 aaPredicted RBP16.68■□□□□ 0.26
VRK3-207ENST00000594092 DENND3A2RUS2 1198 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 N4BP3O15049 544 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 CETN3O15182 167 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 CLIC2O15247 247 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 DUSP11O75319 330 aaKnown RBP16.68■□□□□ 0.26
VRK3-207ENST00000594092 NR3C1P04150 777 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 ELNP15502 786 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 CPT1AP50416 773 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 NFIL3Q16649 462 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 PTPN21Q16825 1174 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 IER5Q5VY09 327 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 HS2ST1Q7LGA3 356 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 SYCP3Q8IZU3 236 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 LRRC71Q8N4P6 559 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 HVCN1Q96D96 273 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 TUBGCP2Q9BSJ2 902 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 KCNF1Q9H3M0 494 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 TMEM206Q9H813 350 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 SUGCTQ9HAC7 445 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 ARHGAP28Q9P2N2 729 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 KCNG1Q9UIX4 513 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 TBX20Q9UMR3 447 aa16.68■□□□□ 0.26
VRK3-207ENST00000594092 FKTNO75072 461 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 C22orf31O95567 290 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 GNRH1P01148 92 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 NAMPTP43490 491 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 MTIF2P46199 727 aaKnown RBP16.67■□□□□ 0.26
VRK3-207ENST00000594092 IGBP1P78318 339 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 PPP2R5AQ15172 486 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 TCP11Q8WWU5 503 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 KAT2BQ92831 832 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 ERO1AQ96HE7 468 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 AGPAT3Q9NRZ7 376 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 COL1A2P08123 1366 aa16.67■□□□□ 0.26
VRK3-207ENST00000594092 H0YCG3 227 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 SEPT4O43236 478 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 ADCY3O60266 1144 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 F2P00734 622 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 BEX3Q00994 111 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 FSCN1Q16658 493 aaKnown RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 BRDTQ58F21 947 aaPredicted RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 MAP4K3Q8IVH8 894 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 CCDC150Q8NCX0 1101 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 GOLGA5Q8TBA6 731 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 ZNF296Q8WUU4 475 aaPredicted RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 PRPF31Q8WWY3 499 aaKnown RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 ZBTB10Q96DT7 871 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 LGALS16A8MUM7 142 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 GNA14O95837 355 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 TPM2P07951 284 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 CNGA1P29973 690 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 PPFIA1Q13136 1202 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 CAPSQ13938 189 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 CCDC40Q4G0X9 1142 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 EFCAB12Q6NXP0 572 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 TAS1R3Q7RTX0 852 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 LRRC8AQ8IWT6 810 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 CACTINQ8WUQ7 758 aaKnown RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
VRK3-207ENST00000594092 KCNN1Q92952 543 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 DMAC2Q9NW81 257 aa16.66■□□□□ 0.26
VRK3-207ENST00000594092 MAGEB2O15479 319 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 KLRC1P26715 233 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 PBX1P40424 430 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 CLCN3P51790 818 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 MARSP56192 900 aaKnown RBP16.65■□□□□ 0.26
VRK3-207ENST00000594092 GJA9P57773 515 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 GRIK4Q16099 956 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 MIIPQ5JXC2 388 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 DEPTORQ8TB45 409 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 RAET1EQ8TD07 263 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
VRK3-207ENST00000594092 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
VRK3-207ENST00000594092 SUCLA2Q9P2R7 463 aaPredicted RBP16.65■□□□□ 0.26
VRK3-207ENST00000594092 EXOC7Q9UPT5 735 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 CENPFP49454 3210 aa16.65■□□□□ 0.26
VRK3-207ENST00000594092 MYADML2A6NDP7 307 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 TISP43B9A030 160 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 AKAP3O75969 853 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 HMGCRP04035 888 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 MYL3P08590 195 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 C6orf222P0C671 652 aaPredicted RBP16.64■□□□□ 0.25
VRK3-207ENST00000594092 SCP2P22307 547 aa16.64■□□□□ 0.25
VRK3-207ENST00000594092 CCND3P30281 292 aaPredicted RBP16.64■□□□□ 0.25
VRK3-207ENST00000594092 ABCD1P33897 745 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms