RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 TCP11Q8WWU5 503 aa20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 MTRQ99707 1265 aa20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 INO80BQ9C086 356 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 MINDY3Q9H8M7 445 aa20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 RNF19AQ9NV58 838 aa20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 ARID2Q68CP9 1835 aa20.61■□□□□ 0.89
SHKBP1-202ENST00000593764 RALGAPA2Q2PPJ7 1873 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 A0A0U1RQF3 1178 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 ASAP2O43150 1006 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 DGAT1O75907 488 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 SRGAP2CP0DJJ0 459 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 FGFR1P11362 822 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 PDIA5Q14554 519 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 IL17AQ16552 155 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 ECM1Q16610 540 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 LARP1BQ659C4 914 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 ECHDC2Q86YB7 292 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 IGSF22Q8N9C0 903 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 MRPL38Q96DV4 380 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 ATP6V0A4Q9HBG4 840 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 CHST12Q9NRB3 414 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 DBR1Q9UK59 544 aaKnown RBP20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 RWDD3Q9Y3V2 267 aa20.6■□□□□ 0.89
SHKBP1-202ENST00000593764 FNDC1Q4ZHG4 1894 aaPredicted RBP20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 SFPQP23246 707 aaKnown RBP eCLIP20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 ARL2P36404 184 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 RILPL1Q5EBL4 403 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 POTEGQ6S5H5 508 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 ZNF598Q86UK7 904 aaKnown RBP20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 RNF149Q8NC42 400 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 ERMNQ8TAM6 284 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 NACC1Q96RE7 527 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 TRAIPQ9BWF2 469 aa20.59■□□□□ 0.89
SHKBP1-202ENST00000593764 TBKBP1A7MCY6 615 aa20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 LAD1O00515 517 aa20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 ATF7P17544 494 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 MXD4Q14582 209 aaPredicted RBP20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 CASD1Q96PB1 797 aa20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 PLVAPQ9BX97 442 aa20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 DACT1Q9NYF0 836 aa20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 LRWD1Q9UFC0 647 aa20.58■□□□□ 0.89
SHKBP1-202ENST00000593764 BRWD1Q9NSI6 2320 aa20.58■□□□□ 0.88
SHKBP1-202ENST00000593764 GRM6O15303 877 aa20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 MUTP22033 750 aa20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 HOXA11P31270 313 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 PRPHP41219 470 aa20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 CATSPER4Q7RTX7 472 aa20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 ASAP3Q8TDY4 903 aa20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 C11orf84Q9BUA3 381 aaPredicted RBP20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 TYW1Q9NV66 732 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 THEGQ9P2T0 379 aa20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 HCSTQ9UBK5 93 aa20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 PIN4Q9Y237 131 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-202ENST00000593764 USO1O60763 962 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 EOMESO95936 686 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 GLRA2P23416 452 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 CCT6AP40227 531 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 PHKA2P46019 1235 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 PTENP60484 403 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 ATP2C1P98194 919 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 POU5F1BQ06416 359 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 SKIV2LQ15477 1246 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 PTPROQ16827 1216 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 CLLU1OSQ5K130 101 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 HAUS3Q68CZ6 603 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 LRRC55Q6ZSA7 311 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 IFNLR1Q8IU57 520 aaPredicted RBP20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 P2RX5Q93086 422 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 CCDC43Q96MW1 224 aaKnown RBP20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 TMEM117Q9H0C3 514 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 CWH43Q9H720 699 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 GPRC5CQ9NQ84 441 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 AGPAT5Q9NUQ2 364 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 PLAGL2Q9UPG8 496 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 CUL9Q8IWT3 2517 aa20.56■□□□□ 0.88
SHKBP1-202ENST00000593764 PP2D1A8MPX8 630 aa20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 ITGB1P05556 798 aa20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 CAPSQ13938 189 aa20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 CAMK1Q14012 370 aa20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 NAALADL2Q58DX5 795 aa20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 TWF2Q6IBS0 349 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 ALG13Q9NP73 1137 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 KIAA1671Q9BY89 1806 aa20.55■□□□□ 0.88
SHKBP1-202ENST00000593764 HOXA2O43364 376 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 ZNF623O75123 536 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 DNAJB1P25685 340 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 CDC25AP30304 524 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 TFF2Q03403 129 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 PADI6Q6TGC4 694 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 DTHD1Q6ZMT9 781 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 MAEAQ7L5Y9 396 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 KLHL23Q8NBE8 558 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 RNF169Q8NCN4 708 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 SPPL3Q8TCT6 385 aa20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 INTS4Q96HW7 963 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-202ENST00000593764 ASB2Q96Q27 587 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms