RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 BAIAP3O94812 1187 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 SRGAP2CP0DJJ0 459 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 GLRA2P23416 452 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 GUCY2CP25092 1073 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 CAPSQ13938 189 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 IKBKEQ14164 716 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 TCTN1Q2MV58 587 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 NAALADL2Q58DX5 795 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 KIFAP3Q92845 792 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 DRC1Q96MC2 740 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 TIPINQ9BVW5 301 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 INO80BQ9C086 356 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-221ENST00000593026 PADI3Q9ULW8 664 aa16.55■□□□□ 0.24
DDX39A-221ENST00000593026 ABHD14A-ACY1A0A1B0GW23 586 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 EFCAB14O75071 495 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 CMA1P23946 247 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 PHKA2P46019 1235 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 POU5F1BQ06416 359 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 RAD51AP2Q09MP3 1159 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 NFX1Q12986 1120 aaKnown RBP16.54■□□□□ 0.24
DDX39A-221ENST00000593026 PPP2R5AQ15172 486 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 FAM228AQ86W67 206 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 CUEDC2Q9H467 287 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 IFT122Q9HBG6 1241 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 ERVK-5Q9HDB9 667 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 ST3GAL5Q9UNP4 418 aa16.54■□□□□ 0.24
DDX39A-221ENST00000593026 A0A1W2PQ27 194 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 A0A1W2PQ64 194 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 A0A1W2PQD8 194 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 LRRIQ4A6NIV6 560 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 CSDE1O75534 798 aaKnown RBP16.53■□□□□ 0.24
DDX39A-221ENST00000593026 KRT18P05783 430 aaKnown RBP16.53■□□□□ 0.24
DDX39A-221ENST00000593026 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
DDX39A-221ENST00000593026 NAMPTP43490 491 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 KCNJ6P48051 423 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 E2F4Q16254 413 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 ARSHQ5FYA8 562 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 RASIP1Q5U651 963 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 SV2BQ7L1I2 683 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 SRGAP1Q7Z6B7 1085 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 DAW1Q8N136 415 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 IQUBQ8NA54 791 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 BSNDQ8WZ55 320 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 DHX58Q96C10 678 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 IFT74Q96LB3 600 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 PYM1Q9BRP8 204 aaKnown RBP16.53■□□□□ 0.24
DDX39A-221ENST00000593026 FTHL17Q9BXU8 183 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 CXXC1Q9P0U4 656 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-221ENST00000593026 KCNH3Q9ULD8 1083 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 SLC4A7Q9Y6M7 1214 aa16.53■□□□□ 0.24
DDX39A-221ENST00000593026 NPHP3-ACAD11A0A0J9YXS1 232 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 GOLGA6L4A6NEF3 574 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
DDX39A-221ENST00000593026 PFKFB1P16118 471 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 FGFR4P22455 802 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDX39A-221ENST00000593026 PTENP60484 403 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
DDX39A-221ENST00000593026 CACNB1Q02641 598 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-221ENST00000593026 MAPK7Q13164 816 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 CSPP1Q1MSJ5 1256 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 FAM43BQ6ZT52 329 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-221ENST00000593026 IFNLR1Q8IU57 520 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-221ENST00000593026 DEPTORQ8TB45 409 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 REEP2Q9BRK0 252 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 C17orf75Q9HAS0 396 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 ODF2LQ9ULJ1 636 aa16.52■□□□□ 0.24
DDX39A-221ENST00000593026 A0A1B0GVL5 298 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 INO80B-WBP1J3KQ70 363 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 TBCAO75347 108 aaKnown RBP16.51■□□□□ 0.23
DDX39A-221ENST00000593026 DMP1Q13316 513 aaPredicted RBP16.51■□□□□ 0.23
DDX39A-221ENST00000593026 CATSPER4Q7RTX7 472 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 ZBTB8OSQ8IWT0 167 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 MRPS27Q92552 414 aaKnown RBP16.51■□□□□ 0.23
DDX39A-221ENST00000593026 NFKBIZQ9BYH8 718 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 TMX1Q9H3N1 280 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 MINDY3Q9H8M7 445 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 MICAL3Q7RTP6 2002 aa16.51■□□□□ 0.23
DDX39A-221ENST00000593026 DENND3A2RUS2 1198 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 CCDC169A6NNP5 214 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 SFI1A8K8P3 1242 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 ERLIN2O94905 339 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 FAM13AO94988 1023 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 AMHP03971 560 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 PEX3P56589 373 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 GIT2Q14161 759 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-221ENST00000593026 DYMQ7RTS9 669 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 FSIP1Q8NA03 581 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 DDX12PQ92771 950 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 SLC9A7Q96T83 725 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 LRRC27Q9C0I9 530 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 C2orf40Q9H1Z8 148 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 TNMDQ9H2S6 317 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 LARSQ9P2J5 1176 aaKnown RBP16.5■□□□□ 0.23
DDX39A-221ENST00000593026 HPSEQ9Y251 543 aa16.5■□□□□ 0.23
DDX39A-221ENST00000593026 FAM237AA0A1B0GTK4 181 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms