RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CXCL10P02778 98 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 VTNP04004 478 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 KLRC1P26715 233 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 SLC26A2P50443 739 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 METTL13Q8N6R0 699 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 DNAJB3Q8WWF6 145 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 TRIM9Q9C026 710 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 IKZF4Q9H2S9 585 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 NKX2-4Q9H2Z4 354 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 CLSTN2Q9H4D0 955 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 DHX33Q9H6R0 707 aaKnown RBP10.7□□□□□ -0.7
DDX39A-220ENST00000593008 ATP6V0A4Q9HBG4 840 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 NRBP2Q9NSY0 501 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 USP20Q9Y2K6 914 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 YBX2Q9Y2T7 364 aaKnown RBP10.7□□□□□ -0.7
DDX39A-220ENST00000593008 COL6A3P12111 3177 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 SIP14410 1827 aa10.7□□□□□ -0.7
DDX39A-220ENST00000593008 IGKV6-21A0A0C4DH24 114 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 MBLAC1A4D2B0 266 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-220ENST00000593008 RRN3P2A6NIE6 340 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 SLC26A4O43511 780 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 KLRC4O43908 158 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 MAFO75444 373 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-220ENST00000593008 CHRNA1P02708 482 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 EDN1P05305 212 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 KRT18P05783 430 aaKnown RBP10.69□□□□□ -0.7
DDX39A-220ENST00000593008 MUTP22033 750 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 GLRA2P23416 452 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 KCNJ6P48051 423 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 ASIC1P78348 528 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 DEFB103AP81534 67 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 TBC1D8BQ0IIM8 1120 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 DPYDQ12882 1025 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 GIT2Q14161 759 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 GRIN2CQ14957 1233 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 POSTNQ15063 836 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 ZNF484Q5JVG2 852 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 ISM2Q6H9L7 571 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 EFCAB12Q6NXP0 572 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 CAVIN1Q6NZI2 390 aaKnown RBP10.69□□□□□ -0.7
DDX39A-220ENST00000593008 TAF2Q6P1X5 1199 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 CNKSR3Q6P9H4 555 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 SV2BQ7L1I2 683 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 SMYD4Q8IYR2 804 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-220ENST00000593008 CEP57L1Q8IYX8 460 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 DBF4BQ8NFT6 615 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 DDX12PQ92771 950 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 CDX2Q99626 313 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-220ENST00000593008 ZHX3Q9H4I2 956 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 ZNF576Q9H609 170 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 CDHR5Q9HBB8 845 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 MSRAQ9UJ68 235 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 STK24Q9Y6E0 443 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 CHD9Q3L8U1 2897 aa10.69□□□□□ -0.7
DDX39A-220ENST00000593008 TANC1Q9C0D5 1861 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 COL1A2P08123 1366 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 BIN1O00499 593 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-220ENST00000593008 TRAK2O60296 914 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.7
DDX39A-220ENST00000593008 CAND2O75155 1236 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 CSDE1O75534 798 aaKnown RBP10.68□□□□□ -0.7
DDX39A-220ENST00000593008 BAIAP3O94812 1187 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 PARNO95453 639 aaKnown RBP10.68□□□□□ -0.7
DDX39A-220ENST00000593008 GHRP10912 638 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 CASP5P51878 434 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 WDR5P61964 334 aaKnown RBP10.68□□□□□ -0.7
DDX39A-220ENST00000593008 CAPSQ13938 189 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 IKBKEQ14164 716 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 RAB30Q15771 203 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 FAM117BQ6P1L5 589 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.68□□□□□ -0.71e-6■■■■□ 20.8
DDX39A-220ENST00000593008 OTUD6AQ7L8S5 288 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 RSPH3Q86UC2 560 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 SFR1Q86XK3 245 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 HERC6Q8IVU3 1022 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 KIAA0319LQ8IZA0 1049 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 MYLIPQ8WY64 445 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 NUP62CLQ9H1M0 184 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 TNMDQ9H2S6 317 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 SUCLA2Q9P2R7 463 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-220ENST00000593008 PCDHA2Q9Y5H9 948 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 CDY2AQ9Y6F7 541 aa10.68□□□□□ -0.7
DDX39A-220ENST00000593008 TET1Q8NFU7 2136 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 ABHD14A-ACY1A0A1B0GW23 586 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 DGAT1O75907 488 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 MBD3O95983 291 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 CA3P07451 260 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 XRCC6P12956 609 aaKnown RBP eCLIP10.67□□□□□ -0.7
DDX39A-220ENST00000593008 IDEP14735 1019 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 FGFR4P22455 802 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 GUCY2CP25092 1073 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 NMT1P30419 496 aaKnown RBP10.67□□□□□ -0.7
DDX39A-220ENST00000593008 ARL2P36404 184 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 RFC5P40937 340 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 MRPS6P82932 125 aaKnown RBP10.67□□□□□ -0.7
DDX39A-220ENST00000593008 MGAT3Q09327 533 aa10.67□□□□□ -0.7
DDX39A-220ENST00000593008 COASYQ13057 564 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms