RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 LMO3Q8TAP4 145 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 CTNNBL1Q8WYA6 563 aaPredicted RBP12.6□□□□□ -0.39
ZNF540-210ENST00000592533 DYDC2Q96IM9 177 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 OSGEPQ9NPF4 335 aa12.6□□□□□ -0.39
ZNF540-210ENST00000592533 IGSF9BQ9UPX0 1349 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 ANKRD62A6NC57 917 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 FAM187AA6NFU0 413 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 ZNF76P36508 570 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 FLT3P36888 993 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 CACNB3P54284 484 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 CTTNQ14247 550 aaKnown RBP12.59□□□□□ -0.39
ZNF540-210ENST00000592533 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 LRCH2Q5VUJ6 765 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 HS2ST1Q7LGA3 356 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 NACC1Q96RE7 527 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 PPP1R9AQ9ULJ8 1098 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 USP20Q9Y2K6 914 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 PCDHAC2Q9Y5I4 1007 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 C5orf60A6NFR6 353 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 TRAPPC3O43617 180 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 FGGP02679 453 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 DHX34Q14147 1143 aaKnown RBP12.59□□□□□ -0.39
ZNF540-210ENST00000592533 SKIDA1Q1XH10 827 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 ZC2HC1CQ53FD0 456 aaPredicted RBP12.59□□□□□ -0.39
ZNF540-210ENST00000592533 DUPD1Q68J44 220 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 PIGOQ8TEQ8 1089 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 RABEP2Q9H5N1 569 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 ZDHHC18Q9NUE0 388 aa12.59□□□□□ -0.39
ZNF540-210ENST00000592533 PFASO15067 1338 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 KIAA0754O94854 1291 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 GDF11O95390 407 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 PPP2R2AP63151 447 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 JAG1P78504 1218 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 RHOT2Q8IXI1 618 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 TLCD1Q96CP7 247 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 MASTLQ96GX5 879 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 WDR11Q9BZH6 1224 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 P4HA2O15460 535 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 VIL1P09327 827 aaKnown RBP12.58□□□□□ -0.4
ZNF540-210ENST00000592533 NUDT17P0C025 328 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 MAPTP10636 758 aaKnown RBP12.58□□□□□ -0.4
ZNF540-210ENST00000592533 HSPA6P17066 643 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 PDE6BP35913 854 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 MYL7Q01449 175 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 BFSP1Q12934 665 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 COG2Q14746 738 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.4
ZNF540-210ENST00000592533 FAM178BQ8IXR5 827 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 C12orf56Q8IXR9 622 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 DEFB129Q9H1M3 183 aa12.58□□□□□ -0.4
ZNF540-210ENST00000592533 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 SFI1A8K8P3 1242 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 G3V3G9 751 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 PMM2O15305 246 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 VCAM1P19320 739 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 STAT2P52630 851 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 SETQ01105 290 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 ARMC9Q7Z3E5 817 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 KIAA0825Q8IV33 1275 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 TPH2Q8IWU9 490 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 OTUD6BQ8N6M0 293 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 OR2W6PQ8NHA6 318 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 NEK9Q8TD19 979 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 CYFIP2Q96F07 1278 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 IKZF4Q9H2S9 585 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 GOLGA6L10A0A0M3HER8 536 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 GMNCA6NCL1 334 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 MIF4GDA9UHW6 222 aaKnown RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 PLA2G6O60733 806 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 MTA2O94776 668 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 GH2P01242 217 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 IKQ13123 557 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 MAPK7Q13164 816 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 SEPT12Q8IYM1 358 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 UBLCP1Q8WVY7 318 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 CENPTQ96BT3 561 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 ARHGEF26Q96DR7 871 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 FMO2Q99518 471 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 ERP44Q9BS26 406 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 CELF4Q9BZC1 486 aaKnown RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 EHMT1Q9H9B1 1298 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 ZNF536O15090 1300 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 SYNGAP1Q96PV0 1343 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 VGLL3A8MV65 326 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 MAPK13O15264 365 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 TAL1P17542 331 aaPredicted RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 GBP1P32455 592 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 SEC24CP53992 1094 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 ALCAMQ13740 583 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 CEP55Q53EZ4 464 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 NLGN1Q8N2Q7 840 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 EPB41L4BQ9H329 900 aa12.57□□□□□ -0.4
ZNF540-210ENST00000592533 CNOT10Q9H9A5 744 aaKnown RBP12.57□□□□□ -0.4
ZNF540-210ENST00000592533 DBNDD1Q9H9R9 158 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms