RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 SYMPKQ92797 1274 aaKnown RBP22.54■■□□□ 1.2
CIRBP-239ENST00000592467 HLA-CQ95604 372 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 SCLT1Q96NL6 688 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 TRAIPQ9BWF2 469 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 LMAN2LQ9H0V9 348 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 CWH43Q9H720 699 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 BMP2KQ9NSY1 1161 aaPredicted RBP22.54■■□□□ 1.2
CIRBP-239ENST00000592467 COL4A3BPQ9Y5P4 624 aa22.54■■□□□ 1.2
CIRBP-239ENST00000592467 A0A0U1RQF3 1178 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 TBKBP1A7MCY6 615 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 ITGB1P05556 798 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 ZSCAN20P17040 1043 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-239ENST00000592467 TRAPPC10P48553 1259 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 NBR1Q14596 966 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 NAALADL2Q58DX5 795 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 TCEAL5Q5H9L2 206 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 TTC38Q5R3I4 469 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 LRRC55Q6ZSA7 311 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 EXOC8Q8IYI6 725 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 SPPL3Q8TCT6 385 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 NLRP4Q96MN2 994 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 CASD1Q96PB1 797 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 MINDY3Q9H8M7 445 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 ATP6V0A4Q9HBG4 840 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 ALG13Q9NP73 1137 aaKnown RBP22.53■■□□□ 1.2
CIRBP-239ENST00000592467 ANKEF1Q9NU02 776 aa22.53■■□□□ 1.2
CIRBP-239ENST00000592467 RNF216Q9NWF9 866 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-239ENST00000592467 A0A087WWV3 80 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 GAS2O43903 313 aaKnown RBP22.52■■□□□ 1.2
CIRBP-239ENST00000592467 MED24O75448 989 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 OR52Z1P0C646 297 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 RARRES1P49788 294 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 LAMTOR4Q0VGL1 99 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 TIGD5Q53EQ6 642 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 CATSPER3Q86XQ3 398 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 KLHL23Q8NBE8 558 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 PSPC1Q8WXF1 523 aaKnown RBP22.52■■□□□ 1.2
CIRBP-239ENST00000592467 UPF2Q9HAU5 1272 aaKnown RBP22.52■■□□□ 1.2
CIRBP-239ENST00000592467 CHST12Q9NRB3 414 aa22.52■■□□□ 1.2
CIRBP-239ENST00000592467 TYW1Q9NV66 732 aaKnown RBP22.52■■□□□ 1.2
CIRBP-239ENST00000592467 TECP42680 631 aa22.51■■□□□ 1.19
CIRBP-239ENST00000592467 CLLU1OSQ5K130 101 aa22.51■■□□□ 1.19
CIRBP-239ENST00000592467 FERMT3Q86UX7 667 aa22.51■■□□□ 1.19
CIRBP-239ENST00000592467 MTRQ99707 1265 aa22.51■■□□□ 1.19
CIRBP-239ENST00000592467 INO80BQ9C086 356 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-239ENST00000592467 TMEM117Q9H0C3 514 aa22.51■■□□□ 1.19
CIRBP-239ENST00000592467 NSUN3Q9H649 340 aaKnown RBP22.51■■□□□ 1.19
CIRBP-239ENST00000592467 UBE2ZQ9H832 354 aaPredicted RBP22.51■■□□□ 1.19
CIRBP-239ENST00000592467 XRCC6P12956 609 aaKnown RBP eCLIP22.5■■□□□ 1.19
CIRBP-239ENST00000592467 SFPQP23246 707 aaKnown RBP eCLIP22.5■■□□□ 1.19
CIRBP-239ENST00000592467 ADAMTS19Q8TE59 1207 aa22.5■■□□□ 1.19
CIRBP-239ENST00000592467 PIGOQ8TEQ8 1089 aa22.5■■□□□ 1.19
CIRBP-239ENST00000592467 TCP11Q8WWU5 503 aa22.5■■□□□ 1.19
CIRBP-239ENST00000592467 POLR3CQ9BUI4 534 aaPredicted RBP22.5■■□□□ 1.19
CIRBP-239ENST00000592467 TUFT1Q9NNX1 390 aa22.5■■□□□ 1.19
CIRBP-239ENST00000592467 PCDHB6Q9Y5E3 794 aa22.5■■□□□ 1.19
CIRBP-239ENST00000592467 ASAP2O43150 1006 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 EOMESO95936 686 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 ARL2P36404 184 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 PHKA2P46019 1235 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 AAK1Q2M2I8 961 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 SRGAP1Q7Z6B7 1085 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 AGPAT5Q9NUQ2 364 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 DACT1Q9NYF0 836 aa22.49■■□□□ 1.19
CIRBP-239ENST00000592467 DGAT1O75907 488 aa22.48■■□□□ 1.19
CIRBP-239ENST00000592467 SRGAP2CP0DJJ0 459 aa22.48■■□□□ 1.19
CIRBP-239ENST00000592467 GJB2P29033 226 aa22.48■■□□□ 1.19
CIRBP-239ENST00000592467 HOXA11P31270 313 aaPredicted RBP22.48■■□□□ 1.19
CIRBP-239ENST00000592467 IRS1P35568 1242 aa22.48■■□□□ 1.19
CIRBP-239ENST00000592467 MCM2P49736 904 aa22.48■■□□□ 1.19
CIRBP-239ENST00000592467 FXR2P51116 673 aaKnown RBP eCLIP22.48■■□□□ 1.19
CIRBP-239ENST00000592467 IFNLR1Q8IU57 520 aaPredicted RBP22.48■■□□□ 1.19
CIRBP-239ENST00000592467 COLGALT1Q8NBJ5 622 aa22.48■■□□□ 1.19
CIRBP-239ENST00000592467 ASAP3Q8TDY4 903 aa22.48■■□□□ 1.19
CIRBP-239ENST00000592467 PIN4Q9Y237 131 aaKnown RBP22.48■■□□□ 1.19
CIRBP-239ENST00000592467 MEIS3P2A8K0S8 358 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 HOXA2O43364 376 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 RPA1P27694 616 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 HYAL1Q12794 435 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 ECM1Q16610 540 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 CTC1Q2NKJ3 1217 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 UBXN11Q5T124 520 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 CATSPER4Q7RTX7 472 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 RNF149Q8NC42 400 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 POF1BQ8WVV4 589 aa22.47■■□□□ 1.19
CIRBP-239ENST00000592467 NECAB3Q96P71 396 aaPredicted RBP22.47■■□□□ 1.19
CIRBP-239ENST00000592467 DBR1Q9UK59 544 aaKnown RBP22.47■■□□□ 1.19
CIRBP-239ENST00000592467 NOL7Q9UMY1 257 aaKnown RBP22.47■■□□□ 1.19
CIRBP-239ENST00000592467 ZNF623O75123 536 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 GLRA2P23416 452 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 LTBRP36941 435 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 PTENP60484 403 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 POU5F1BQ06416 359 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 PTGDRQ13258 359 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 GNL2Q13823 731 aaKnown RBP22.46■■□□□ 1.19
CIRBP-239ENST00000592467 CAPSQ13938 189 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 IL17AQ16552 155 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 LEXMQ3ZCV2 418 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 POTEGQ6S5H5 508 aa22.46■■□□□ 1.19
CIRBP-239ENST00000592467 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms