RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PRPF31Q8WWY3 499 aaKnown RBP16.95■□□□□ 0.3
ERCC1-213ENST00000592023 SYMPKQ92797 1274 aaKnown RBP16.95■□□□□ 0.3
ERCC1-213ENST00000592023 HLA-CQ95604 372 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 PLVAPQ9BX97 442 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 INO80BQ9C086 356 aaPredicted RBP16.95■□□□□ 0.3
ERCC1-213ENST00000592023 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
ERCC1-213ENST00000592023 XPNPEP1Q9NQW7 623 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 TRANK1O15050 2925 aa16.95■□□□□ 0.3
ERCC1-213ENST00000592023 A0A087WWV3 80 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 SRGAP2CP0DJJ0 459 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 U2AF2P26368 475 aaKnown RBP eCLIP16.94■□□□□ 0.3
ERCC1-213ENST00000592023 GJB2P29033 226 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 FAM189BP81408 668 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 LAMTOR4Q0VGL1 99 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 AAK1Q2M2I8 961 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 TCEAL5Q5H9L2 206 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 MCTP1Q6DN14 999 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 ABI1Q8IZP0 508 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 LMAN2LQ9H0V9 348 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 NSUN3Q9H649 340 aaKnown RBP16.94■□□□□ 0.3
ERCC1-213ENST00000592023 IFT122Q9HBG6 1241 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 ANKEF1Q9NU02 776 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 RNF19AQ9NV58 838 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 DACT1Q9NYF0 836 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 PLXNA4Q9HCM2 1894 aa16.94■□□□□ 0.3
ERCC1-213ENST00000592023 HOXA2O43364 376 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 USO1O60763 962 aaKnown RBP16.93■□□□□ 0.3
ERCC1-213ENST00000592023 MED24O75448 989 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 ITGB1P05556 798 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 SPATA31C1P0DKV0 1188 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 ATF7P17544 494 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-213ENST00000592023 RARRES1P49788 294 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 TWF2Q6IBS0 349 aaKnown RBP16.93■□□□□ 0.3
ERCC1-213ENST00000592023 POTEGQ6S5H5 508 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 FERMT3Q86UX7 667 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 KLHL23Q8NBE8 558 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 RNF149Q8NC42 400 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 ADAMTS19Q8TE59 1207 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 P2RX5Q93086 422 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 TMEM117Q9H0C3 514 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 UBE2ZQ9H832 354 aaPredicted RBP16.93■□□□□ 0.3
ERCC1-213ENST00000592023 TUFT1Q9NNX1 390 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 PLAGL2Q9UPG8 496 aa16.93■□□□□ 0.3
ERCC1-213ENST00000592023 A0A0U1RQF3 1178 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 DGAT1O75907 488 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 TOB1P50616 345 aaPredicted RBP16.92■□□□□ 0.3
ERCC1-213ENST00000592023 CLLU1OSQ5K130 101 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 CATSPER3Q86XQ3 398 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 LRRC43Q8N309 656 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 ERMNQ8TAM6 284 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 MINDY3Q9H8M7 445 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 CHST12Q9NRB3 414 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 AGPAT5Q9NUQ2 364 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 TYW1Q9NV66 732 aaKnown RBP16.92■□□□□ 0.3
ERCC1-213ENST00000592023 SMC3Q9UQE7 1217 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 PCDHB6Q9Y5E3 794 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 REV3LO60673 3130 aa16.92■□□□□ 0.3
ERCC1-213ENST00000592023 H3BQV1 296 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 LAG3P18627 525 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 KCNA5P22460 613 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 DNAJB1P25685 340 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 PHKA2P46019 1235 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 LONRF3Q496Y0 759 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 NAALADL2Q58DX5 795 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 HAUS3Q68CZ6 603 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 EP400NLQ6ZTU2 488 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 SRGAP1Q7Z6B7 1085 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 ZNF598Q86UK7 904 aaKnown RBP16.91■□□□□ 0.3
ERCC1-213ENST00000592023 COLGALT1Q8NBJ5 622 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 HELQQ8TDG4 1101 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 ASAP3Q8TDY4 903 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 POF1BQ8WVV4 589 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 CASD1Q96PB1 797 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 POLR3CQ9BUI4 534 aaPredicted RBP16.91■□□□□ 0.3
ERCC1-213ENST00000592023 POLR3FQ9H1D9 316 aaPredicted RBP16.91■□□□□ 0.3
ERCC1-213ENST00000592023 CWH43Q9H720 699 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 AAASQ9NRG9 546 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 PCDHB12Q9Y5F1 795 aa16.91■□□□□ 0.3
ERCC1-213ENST00000592023 TCF20Q9UGU0 1960 aaKnown RBP16.91■□□□□ 0.3
ERCC1-213ENST00000592023 ASAP2O43150 1006 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 ERLIN2O94905 339 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
ERCC1-213ENST00000592023 PTGDRQ13258 359 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 CAPSQ13938 189 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 CAMK1Q14012 370 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 TFDP1Q14186 410 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 MXD4Q14582 209 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-213ENST00000592023 MAEAQ7L5Y9 396 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 THNSL1Q8IYQ7 743 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 C4orf32Q8N8J7 132 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 SPPL3Q8TCT6 385 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 LPPQ93052 612 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 NECAB3Q96P71 396 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-213ENST00000592023 FAM105AQ9NUU6 356 aa16.9■□□□□ 0.3
ERCC1-213ENST00000592023 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.9■□□□□ 0.3
ERCC1-213ENST00000592023 EOMESO95936 686 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 BMP1P13497 986 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 RPA1P27694 616 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 IRS1P35568 1242 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 CCT6AP40227 531 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms