RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 DDX19AQ9NUU7 478 aaKnown RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 DACT1Q9NYF0 836 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 DBR1Q9UK59 544 aaKnown RBP11.2□□□□□ -0.62
BRCA1-227ENST00000591849 TET1Q8NFU7 2136 aa11.2□□□□□ -0.62
BRCA1-227ENST00000591849 MYH9P35579 1960 aaKnown RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 LINC01553A4QN01 128 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 ERLIN2O94905 339 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 SSBP05455 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 PDIA4P13667 645 aaKnown RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 CDC25AP30304 524 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 UBA7P41226 1012 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 HTRA4P83105 476 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 CEBPZQ03701 1054 aaKnown RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 PAN2Q504Q3 1202 aaKnown RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 FOXD4L5Q5VV16 416 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 TWF2Q6IBS0 349 aaKnown RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 PADI6Q6TGC4 694 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 IGSF22Q8N9C0 903 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 FBXO22Q8NEZ5 403 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 FOXD4L4Q8WXT5 416 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 SYMPKQ92797 1274 aaKnown RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 SAMD11Q96NU1 681 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 POLR3FQ9H1D9 316 aaPredicted RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 CHST12Q9NRB3 414 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 PIN4Q9Y237 131 aaKnown RBP11.19□□□□□ -0.62
BRCA1-227ENST00000591849 TANC1Q9C0D5 1861 aa11.19□□□□□ -0.62
BRCA1-227ENST00000591849 TBKBP1A7MCY6 615 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 PP2D1A8MPX8 630 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 INO80B-WBP1J3KQ70 363 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 RFXAPO00287 272 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 HOXA2O43364 376 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 MGEA5O60502 916 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 SKIP12755 728 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 ERVK-21P61565 698 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 RESTQ13127 1097 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 CABP7Q86V35 215 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 LINC01599Q8WXQ3 324 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 CALML4Q96GE6 196 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 IFT74Q96LB3 600 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 ZNF396Q96N95 335 aaPredicted RBP11.18□□□□□ -0.62
BRCA1-227ENST00000591849 PLIN2Q99541 437 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 NT5C3AQ9H0P0 336 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 BHMT2Q9H2M3 363 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 XPNPEP1Q9NQW7 623 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 MTMR6Q9Y217 621 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 RWDD3Q9Y3V2 267 aa11.18□□□□□ -0.62
BRCA1-227ENST00000591849 SPTBN5Q9NRC6 3674 aaKnown RBP11.18□□□□□ -0.62
BRCA1-227ENST00000591849 LRRIQ4A6NIV6 560 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 C9IYK1 514 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 E9PMD0 336 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 DGKIO75912 1065 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 ARHGEF15O94989 841 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 EYA4O95677 639 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 LIG1P18858 919 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 CYP11B2P19099 503 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 CTNNB1P35222 781 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 LONP1P36776 959 aaKnown RBP11.17□□□□□ -0.62
BRCA1-227ENST00000591849 BECN1Q14457 450 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 DSC3Q14574 896 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 SKIV2LQ15477 1246 aaKnown RBP11.17□□□□□ -0.62
BRCA1-227ENST00000591849 CCDC85BQ15834 202 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-227ENST00000591849 IL17AQ16552 155 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 ZBTB8OSQ8IWT0 167 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 TMEM192Q8IY95 271 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 CMTR2Q8IYT2 770 aaKnown RBP11.17□□□□□ -0.62
BRCA1-227ENST00000591849 DEPTORQ8TB45 409 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 ASAP3Q8TDY4 903 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 AK8Q96MA6 479 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 C17orf80Q9BSJ5 609 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 ELAC1Q9H777 363 aaKnown RBP11.17□□□□□ -0.62
BRCA1-227ENST00000591849 GPRC5CQ9NQ84 441 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 TMEM161AQ9NX61 479 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 CHD9Q3L8U1 2897 aa11.17□□□□□ -0.62
BRCA1-227ENST00000591849 CHD7Q9P2D1 2997 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 ADGRA3Q8IWK6 1321 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 GLRA2P23416 452 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 MARCKSP29966 332 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-227ENST00000591849 ARL2P36404 184 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 BMPR1AP36894 532 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 TXLNAP40222 546 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 PTENP60484 403 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 POU5F1BQ06416 359 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 GPM6BQ13491 265 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 STK38Q15208 465 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 ECM1Q16610 540 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 PTPROQ16827 1216 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 EPC2Q52LR7 807 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 ECHDC2Q86YB7 292 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 SP7Q8TDD2 431 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-227ENST00000591849 GDPD5Q8WTR4 605 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 KIFAP3Q92845 792 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 C2orf40Q9H1Z8 148 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms