RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 MINPP1Q9UNW1 487 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 STK24Q9Y6E0 443 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 MYH8P13535 1937 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 RCCD1A6NED2 376 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 GSTT2P0CG29 244 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 GSTT2BP0CG30 244 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 PORP16435 677 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 PLCG1P19174 1290 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 HALP42357 657 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 DNA2P51530 1060 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 SIK1P57059 783 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 SPATA4Q8NEY3 305 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 STK32AQ8WU08 396 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 P2RX5Q93086 422 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 CPVLQ9H3G5 476 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
SMARCA4-217ENST00000591595 CCNT1O60563 726 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 TACC1O75410 805 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 TPBGLP0DKB5 382 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 HIBADHP31937 336 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 NAPAP54920 295 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 FXNQ16595 210 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 ZNF384Q8TF68 577 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 CELF1Q92879 486 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 HPS3Q969F9 1004 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 ZNF804BA4D1E1 1349 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 MAGEA13PA6NCF6 341 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 ASAP2O43150 1006 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 TJP3O95049 919 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 SRGNP10124 158 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 STK4Q13043 487 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 TTI2Q6NXR4 508 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 C8orf74Q6P047 294 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 NAP1L3Q99457 506 aaPredicted RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 SLC7A5P2Q9GIP4 190 aa13.16□□□□□ -0.3
SMARCA4-217ENST00000591595 USP17L3A6NCW0 530 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 USP17L4A6NCW7 530 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 TMEM110-MUSTN1A8MSY1 372 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 FCER1AP12319 257 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CXCR5P32302 372 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 TCF7P36402 384 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CARSP49589 748 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 COPS2P61201 443 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 PDE1BQ01064 536 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 ITIH3Q06033 890 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 BIRC3Q13489 604 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 ANKRD40Q6AI12 368 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 IFT20Q8IY31 132 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 GIMAP8Q8ND71 665 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 DQX1Q8TE96 717 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 SYNCQ9H7C4 482 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 BIRC5O15392 142 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 RHOBTB3O94955 611 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CCNE1P24864 410 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 TECP42680 631 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 ANKRD13CQ8N6S4 541 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 C4orf32Q8N8J7 132 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 IFT81Q8WYA0 676 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CHD4Q14839 1912 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CYP1A1P04798 512 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 PLEKP08567 350 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 SH3D19Q5HYK7 790 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 PIGWQ7Z7B1 504 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CYP4X1Q8N118 509 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 CDK5RAP3Q96JB5 506 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 GGT7Q9UJ14 662 aa13.15□□□□□ -0.3
SMARCA4-217ENST00000591595 MYH6P13533 1939 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ANO9A1A5B4 782 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ADAMTS2O95450 1211 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 SKIP12755 728 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 AMPD3Q01432 767 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 CREG2Q8IUH2 290 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 SLC7A5P1Q8MH63 180 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 CYP39A1Q9NYL5 469 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 PCDHA6Q9UN73 950 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 PCDHA8Q9Y5H6 950 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 TIAM2Q8IVF5 1701 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 WDR46O15213 610 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms