RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 CACNA1AO00555 2505 aa11.13□□□□□ -0.63
RETREG3-211ENST00000591547 COL4A3Q01955 1670 aa11.13□□□□□ -0.63
RETREG3-211ENST00000591547 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 KRBA1A5PL33 1030 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 STK25O00506 426 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 HOXA2O43364 376 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 N4BP1O75113 896 aaKnown RBP11.12□□□□□ -0.63
RETREG3-211ENST00000591547 ZC3H11AO75152 810 aaKnown RBP eCLIP11.12□□□□□ -0.63
RETREG3-211ENST00000591547 SSBP05455 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
RETREG3-211ENST00000591547 DRP2Q13474 957 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 SPECC1Q5M775 1068 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 MIS18BP1Q6P0N0 1132 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 CABP7Q86V35 215 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 FANCBQ8NB91 859 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 TMEM169Q96HH4 297 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 JAKMIP1Q96N16 626 aaKnown RBP11.12□□□□□ -0.63
RETREG3-211ENST00000591547 DZANK1Q9NVP4 752 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 GABBR1Q9UBS5 961 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 DNAJB4Q9UDY4 337 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 CA14Q9ULX7 337 aa11.12□□□□□ -0.63
RETREG3-211ENST00000591547 MAFBQ9Y5Q3 323 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-211ENST00000591547 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 A0A0U1RQF3 1178 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 SMCO2A6NFE2 343 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 CTSAP10619 480 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 EIF4BP23588 611 aaKnown RBP11.11□□□□□ -0.63
RETREG3-211ENST00000591547 SREBF1P36956 1147 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 ALDH7A1P49419 539 aaKnown RBP11.11□□□□□ -0.63
RETREG3-211ENST00000591547 GPC3P51654 580 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 ADCY7P51828 1080 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 GPR149Q86SP6 731 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
RETREG3-211ENST00000591547 IGSF21Q96ID5 467 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 BACH2Q9BYV9 841 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 GBP3Q9H0R5 595 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 NRDE2Q9H7Z3 1164 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 DUSP12Q9UNI6 340 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 INPP5FQ9Y2H2 1132 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 SLC12A7Q9Y666 1083 aa11.11□□□□□ -0.63
RETREG3-211ENST00000591547 V9GY48 417 aaPredicted RBP11.11□□□□□ -0.63
RETREG3-211ENST00000591547 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 IPO5O00410 1097 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 ZNF862O60290 1169 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 LMNAP02545 664 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 DCNP07585 359 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 GALTP07902 379 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 DARSP14868 501 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 MCM5P33992 734 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 SLC11A1P49279 550 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 CLK2P49760 499 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 AFF1P51825 1210 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 ANAPC15P60006 121 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 PTPN14Q15678 1187 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 UGCGQ16739 394 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 BLOC1S2Q6QNY1 142 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 CCDC149Q6ZUS6 474 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 DDX53Q86TM3 631 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 ZNF280BQ86YH2 543 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 GJA10Q969M2 543 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 ACSF2Q96CM8 615 aaPredicted RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 SCLT1Q96NL6 688 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 KLHL5Q96PQ7 755 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 SH2D3AQ9BRG2 576 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 ZNF577Q9BSK1 485 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 UPF2Q9HAU5 1272 aaKnown RBP11.1□□□□□ -0.63
RETREG3-211ENST00000591547 TBC1D13Q9NVG8 400 aa11.1□□□□□ -0.63
RETREG3-211ENST00000591547 POTEMA6NI47 508 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 LRRN2O75325 713 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 FOSP01100 380 aaPredicted RBP11.09□□□□□ -0.63
RETREG3-211ENST00000591547 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CNPP09543 421 aaKnown RBP11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CALM1P0DP23 149 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CALM2P0DP24 149 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CALM3P0DP25 149 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CPA1P15085 419 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 KLRC2P26717 231 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CLCN4P51793 760 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 FUT2Q10981 343 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 OTOP3Q7RTS5 596 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 TAS1R1Q7RTX1 841 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 TMEM87BQ96K49 555 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CNTNAP3BQ96NU0 1288 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 MAP7D2Q96T17 732 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 RTP3Q9BQQ7 232 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 MTA3Q9BTC8 594 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 CNTNAP3Q9BZ76 1288 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 SFXN1Q9H9B4 322 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 BRPF3Q9ULD4 1205 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 IRAK3Q9Y616 596 aa11.09□□□□□ -0.63
RETREG3-211ENST00000591547 EP300Q09472 2414 aaPredicted RBP11.09□□□□□ -0.63
RETREG3-211ENST00000591547 ZFHX4Q86UP3 3567 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms