RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 STK24Q9Y6E0 443 aa15.61■□□□□ 0.09
SCAMP4-212ENST00000590266 SIP14410 1827 aa15.61■□□□□ 0.09
SCAMP4-212ENST00000590266 A0A0C4DFX4 3053 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 E9PMD0 336 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 XRCC6P12956 609 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 PHKA2P46019 1235 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 PADI6Q6TGC4 694 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 SLC24A5Q71RS6 500 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 ASAP3Q8TDY4 903 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 GDPD5Q8WTR4 605 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 CDK5RAP3Q96JB5 506 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 IFT122Q9HBG6 1241 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 POLD4Q9HCU8 107 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 ADGRA3Q8IWK6 1321 aa15.6■□□□□ 0.09
SCAMP4-212ENST00000590266 LRRIQ4A6NIV6 560 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 ASAP2O43150 1006 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 DGKIO75912 1065 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 BMP15O95972 392 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 SSBP05455 408 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 FGFR1P11362 822 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 CAPSQ13938 189 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 TFDP1Q14186 410 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 ADGRE1Q14246 886 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 DSC3Q14574 896 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 MXD4Q14582 209 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 CCDC85BQ15834 202 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 FOXD4L6Q3SYB3 417 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 LONRF3Q496Y0 759 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 ARL6IP4Q66PJ3 421 aaKnown RBP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 TWF2Q6IBS0 349 aaKnown RBP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 FOXD4L3Q6VB84 417 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 FBXO22Q8NEZ5 403 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 RASSF8Q8NHQ8 419 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 SP7Q8TDD2 431 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 MINDY3Q9H8M7 445 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 DNM3Q9UQ16 869 aa15.59■□□□□ 0.09
SCAMP4-212ENST00000590266 TBKBP1A7MCY6 615 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 C9IYK1 514 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 INO80B-WBP1J3KQ70 363 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 ERLIN2O94905 339 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 CSPG5O95196 566 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 MUTP22033 750 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 GLRA2P23416 452 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 MARCKSP29966 332 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 CTNNB1P35222 781 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 ARL2P36404 184 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 ERVK-21P61565 698 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 GRIN1Q05586 938 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 SRGAP1Q7Z6B7 1085 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 CABP7Q86V35 215 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 MCPH1Q8NEM0 835 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 SYMPKQ92797 1274 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 MMTAG2Q9BU76 263 aaKnown RBP15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 ZSCAN16Q9H4T2 348 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 KAT6AQ92794 2004 aa15.58■□□□□ 0.08
SCAMP4-212ENST00000590266 CHD9Q3L8U1 2897 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 GTPBP6O43824 516 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 LIG1P18858 919 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 UBA7P41226 1012 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 GRB10Q13322 594 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 EPC2Q52LR7 807 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 SPOUT1Q5T280 376 aaKnown RBP15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 KCNK18Q7Z418 384 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 ECHDC2Q86YB7 292 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 TMEM192Q8IY95 271 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 ZNF689Q96CS4 500 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 TMEM161AQ9NX61 479 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 DACT1Q9NYF0 836 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 CUL9Q8IWT3 2517 aa15.57■□□□□ 0.08
SCAMP4-212ENST00000590266 EYA4O95677 639 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 CYP11B2P19099 503 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 RAD51AP2Q09MP3 1159 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 SPECC1Q5M775 1068 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 CMTR2Q8IYT2 770 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 ABI1Q8IZP0 508 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 CALML4Q96GE6 196 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 CPB2Q96IY4 423 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 AK8Q96MA6 479 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 USP28Q96RU2 1077 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 NT5C3AQ9H0P0 336 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 RC3H2Q9HBD1 1191 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 CHST12Q9NRB3 414 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 AGPAT5Q9NUQ2 364 aa15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 MRPL42Q9Y6G3 142 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 MYH9P35579 1960 aaKnown RBP15.56■□□□□ 0.08
SCAMP4-212ENST00000590266 PTPRSQ13332 1948 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 LONP1P36776 959 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 PTENP60484 403 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 NCBP1Q09161 790 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 DHX8Q14562 1220 aaKnown RBP15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 TMEM132AQ24JP5 1023 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 CRIPAKQ8N1N5 446 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 BSNDQ8WZ55 320 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 LPPQ93052 612 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 SAMD11Q96NU1 681 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 PNMA5Q96PV4 448 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 RUSC1Q9BVN2 902 aa15.55■□□□□ 0.08
SCAMP4-212ENST00000590266 CSRNP2Q9H175 543 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms