RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 ZP2Q05996 745 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 ME3Q16798 604 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 RHPN2Q8IUC4 686 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 SLC7A3Q8WY07 619 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 KHSRPQ92945 711 aaKnown RBP eCLIP16.09■□□□□ 0.17
MBD1-220ENST00000589758 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 ZNF558Q96NG5 402 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 POP1Q99575 1024 aaKnown RBP16.09■□□□□ 0.17
MBD1-220ENST00000589758 LRFN3Q9BTN0 628 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 TRAIPQ9BWF2 469 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 TLE6Q9H808 572 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 GJB4Q9NTQ9 266 aa16.09■□□□□ 0.17
MBD1-220ENST00000589758 A0A087WZ62 844 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 C19orf67A6NJJ6 358 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 EYA4O95677 639 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 SKIP12755 728 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 FDPSP14324 419 aaKnown RBP16.08■□□□□ 0.16
MBD1-220ENST00000589758 FGFR4P22455 802 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 PPM1AP35813 382 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 NEK4P51957 841 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 KRT17Q04695 432 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 OTUD6AQ7L8S5 288 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 C4orf19Q8IY42 314 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 NECAB1Q8N987 351 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 RNF169Q8NCN4 708 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
MBD1-220ENST00000589758 HAS1Q92839 578 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 CDCA3Q99618 268 aaPredicted RBP16.08■□□□□ 0.16
MBD1-220ENST00000589758 SH2D3AQ9BRG2 576 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 FDXACB1Q9BRP7 624 aaPredicted RBP16.08■□□□□ 0.16
MBD1-220ENST00000589758 MRPL9Q9BYD2 267 aaKnown RBP16.08■□□□□ 0.16
MBD1-220ENST00000589758 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
MBD1-220ENST00000589758 RNF19AQ9NV58 838 aa16.08■□□□□ 0.16
MBD1-220ENST00000589758 GAS2O43903 313 aaKnown RBP16.07■□□□□ 0.16
MBD1-220ENST00000589758 RFC5P40937 340 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 POLGP54098 1239 aaPredicted RBP16.07■□□□□ 0.16
MBD1-220ENST00000589758 COASYQ13057 564 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 CLUL1Q15846 466 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 KCNT2Q6UVM3 1135 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 RBM23Q86U06 439 aaKnown RBP16.07■□□□□ 0.16
MBD1-220ENST00000589758 ZNF598Q86UK7 904 aaKnown RBP16.07■□□□□ 0.16
MBD1-220ENST00000589758 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 MSLNLQ96KJ4 702 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 CEP170P1Q96L14 293 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 DHX33Q9H6R0 707 aaKnown RBP16.07■□□□□ 0.16
MBD1-220ENST00000589758 HCSTQ9UBK5 93 aa16.07■□□□□ 0.16
MBD1-220ENST00000589758 CARNS1A5YM72 827 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 FSCN2O14926 492 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
MBD1-220ENST00000589758 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 PHKA2P46019 1235 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 RAB27AP51159 221 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 NPEPPSP55786 919 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 ERVFC1P60507 584 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 NR5A1Q13285 461 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 TRIM29Q14134 588 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
MBD1-220ENST00000589758 CLLU1OSQ5K130 101 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 TWF2Q6IBS0 349 aaKnown RBP16.06■□□□□ 0.16
MBD1-220ENST00000589758 NCAPH2Q6IBW4 605 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 CATSPER4Q7RTX7 472 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
MBD1-220ENST00000589758 TCP11Q8WWU5 503 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 TNFRSF25Q93038 417 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 NLRP4Q96MN2 994 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 LXNQ9BS40 222 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 NGRNQ9NPE2 291 aaKnown RBP16.06■□□□□ 0.16
MBD1-220ENST00000589758 SPG21Q9NZD8 308 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 CLEC1BQ9P126 229 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 PIN4Q9Y237 131 aaKnown RBP16.06■□□□□ 0.16
MBD1-220ENST00000589758 COL4A3BPQ9Y5P4 624 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 BDP1A6H8Y1 2624 aa16.06■□□□□ 0.16
MBD1-220ENST00000589758 ASAP2O43150 1006 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 DTNBO60941 627 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 LARGE1O95461 756 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 ATF7P17544 494 aaPredicted RBP16.05■□□□□ 0.16
MBD1-220ENST00000589758 YWHABP31946 246 aaKnown RBP16.05■□□□□ 0.16
MBD1-220ENST00000589758 SPIRE1Q08AE8 756 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 DUSP6Q16828 381 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 KSR1Q8IVT5 923 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 SMRP1Q8NCR6 262 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 HELQQ8TDG4 1101 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 PSPC1Q8WXF1 523 aaKnown RBP16.05■□□□□ 0.16
MBD1-220ENST00000589758 DYDC2Q96IM9 177 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 TCF25Q9BQ70 676 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 IFT122Q9HBG6 1241 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 FAM105AQ9NUU6 356 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 WRAP73Q9P2S5 460 aaPredicted RBP16.05■□□□□ 0.16
MBD1-220ENST00000589758 PCDHA12Q9UN75 941 aa16.05■□□□□ 0.16
MBD1-220ENST00000589758 PER2O15055 1255 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 DCXO43602 365 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 ZNF623O75123 536 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 GLP2RO95838 553 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 ALDH7A1P49419 539 aaKnown RBP16.04■□□□□ 0.16
MBD1-220ENST00000589758 BMS1Q14692 1282 aaKnown RBP16.04■□□□□ 0.16
MBD1-220ENST00000589758 XKR9Q5GH70 373 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms