RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
VAT1-206ENST00000589709 CLEC1BQ9P126 229 aa13.71□□□□□ -0.21
VAT1-206ENST00000589709 SUCLA2Q9P2R7 463 aaPredicted RBP13.71□□□□□ -0.21
VAT1-206ENST00000589709 PUF60Q9UHX1 559 aaKnown RBP13.71□□□□□ -0.21
VAT1-206ENST00000589709 KIAA1671Q9BY89 1806 aa13.71□□□□□ -0.22
VAT1-206ENST00000589709 A0A087WZ62 844 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 FSCN2O14926 492 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 CCNT1O60563 726 aaKnown RBP13.7□□□□□ -0.22
VAT1-206ENST00000589709 CSPG5O95196 566 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 P4HBP07237 508 aaKnown RBP13.7□□□□□ -0.22
VAT1-206ENST00000589709 FDPSP14324 419 aaKnown RBP13.7□□□□□ -0.22
VAT1-206ENST00000589709 SFPQP23246 707 aaKnown RBP eCLIP13.7□□□□□ -0.22
VAT1-206ENST00000589709 PPM1AP35813 382 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 ERVFC1P60507 584 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 EPHA7Q15375 998 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 CLUL1Q15846 466 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 PIK3AP1Q6ZUJ8 805 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
VAT1-206ENST00000589709 FDXACB1Q9BRP7 624 aaPredicted RBP13.7□□□□□ -0.22
VAT1-206ENST00000589709 NGRNQ9NPE2 291 aaKnown RBP13.7□□□□□ -0.22
VAT1-206ENST00000589709 CYP26B1Q9NR63 512 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 RAPGEFL1Q9UHV5 662 aa13.7□□□□□ -0.22
VAT1-206ENST00000589709 DCXO43602 365 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 ZNF623O75123 536 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 CSDE1O75534 798 aaKnown RBP13.69□□□□□ -0.22
VAT1-206ENST00000589709 GLP2RO95838 553 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 SKIP12755 728 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
VAT1-206ENST00000589709 FGFR4P22455 802 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 KRT17Q04695 432 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 ME3Q16798 604 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 DUSP6Q16828 381 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 CLLU1OSQ5K130 101 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 TMEM184AQ6ZMB5 413 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 RBM23Q86U06 439 aaKnown RBP13.69□□□□□ -0.22
VAT1-206ENST00000589709 RHPN2Q8IUC4 686 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 C4orf19Q8IY42 314 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 SLC7A3Q8WY07 619 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 TNFRSF25Q93038 417 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 GTF3C6Q969F1 213 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 ZNF558Q96NG5 402 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 MRPL9Q9BYD2 267 aaKnown RBP13.69□□□□□ -0.22
VAT1-206ENST00000589709 DHX33Q9H6R0 707 aaKnown RBP13.69□□□□□ -0.22
VAT1-206ENST00000589709 SPG21Q9NZD8 308 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 PCDHGC5Q9Y5F6 944 aa13.69□□□□□ -0.22
VAT1-206ENST00000589709 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 PRR33A8MZF0 331 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 MARCH6O60337 910 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
VAT1-206ENST00000589709 KRT2P35908 639 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 RFC5P40937 340 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 PHKA2P46019 1235 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 NPEPPSP55786 919 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 SPIRE1Q08AE8 756 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
VAT1-206ENST00000589709 PLA2G4FQ68DD2 849 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 OTUD6AQ7L8S5 288 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 NECAB1Q8N987 351 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 CEP170P1Q96L14 293 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 ZSWIM4Q9H7M6 989 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 IFT122Q9HBG6 1241 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 BRMS1Q9HCU9 246 aa13.68□□□□□ -0.22
VAT1-206ENST00000589709 PER2O15055 1255 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 ASAP2O43150 1006 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 GAS2O43903 313 aaKnown RBP13.67□□□□□ -0.22
VAT1-206ENST00000589709 RAB27AP51159 221 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 NR5A1Q13285 461 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 KCNC3Q14003 757 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
VAT1-206ENST00000589709 CATSPER4Q7RTX7 472 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 SRGAP1Q7Z6B7 1085 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 POTEDQ86YR6 584 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 KSR1Q8IVT5 923 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 SLC39A11Q8N1S5 342 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
VAT1-206ENST00000589709 NSUN7Q8NE18 718 aaKnown RBP13.67□□□□□ -0.22
VAT1-206ENST00000589709 HELQQ8TDG4 1101 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 TCF25Q9BQ70 676 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 LXNQ9BS40 222 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 WRAP73Q9P2S5 460 aaPredicted RBP13.67□□□□□ -0.22
VAT1-206ENST00000589709 BARX2Q9UMQ3 279 aaPredicted RBP13.67□□□□□ -0.22
VAT1-206ENST00000589709 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 COL4A3BPQ9Y5P4 624 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 PLXNA4Q9HCM2 1894 aa13.67□□□□□ -0.22
VAT1-206ENST00000589709 FAM86C2PA6NEL3 165 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 DTNBO60941 627 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 SLITRK3O94933 977 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 LYPLA2O95372 231 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 SRGAP2BP0DMP2 458 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
VAT1-206ENST00000589709 PLA2G5P39877 138 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 ALDH7A1P49419 539 aaKnown RBP13.66□□□□□ -0.22
VAT1-206ENST00000589709 NEK4P51957 841 aa13.66□□□□□ -0.22
VAT1-206ENST00000589709 POLGP54098 1239 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms