RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 CABP7Q86V35 215 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 C12orf76Q8N812 135 aaPredicted RBP17.2■□□□□ 0.34
ACTN4-211ENST00000589528 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 ACSF2Q96CM8 615 aaPredicted RBP17.2■□□□□ 0.34
ACTN4-211ENST00000589528 SMOC2Q9H3U7 446 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 SPTBN4Q9H254 2564 aa17.2■□□□□ 0.34
ACTN4-211ENST00000589528 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 PRR23AA6NEV1 266 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 GNA11P29992 359 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 NBL1P41271 181 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 RNASELQ05823 741 aaKnown RBP17.19■□□□□ 0.34
ACTN4-211ENST00000589528 PFKFB3Q16875 520 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-211ENST00000589528 DHX32Q7L7V1 743 aaKnown RBP17.19■□□□□ 0.34
ACTN4-211ENST00000589528 ZDHHC14Q8IZN3 488 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 AUTS2Q8WXX7 1259 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 NKD2Q969F2 451 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-211ENST00000589528 GCOM2Q9BZD3 368 aaPredicted RBP17.19■□□□□ 0.34
ACTN4-211ENST00000589528 ZBP1Q9H171 429 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 DISC1Q9NRI5 854 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 USTQ9Y2C2 406 aa17.19■□□□□ 0.34
ACTN4-211ENST00000589528 ESYT2A0FGR8 921 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 CHMP2AO43633 222 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 SKIP12755 728 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 EPCAMP16422 314 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 SFPQP23246 707 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■□□ 17.2
ACTN4-211ENST00000589528 CDC27P30260 824 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 TWF2Q6IBS0 349 aaKnown RBP17.18■□□□□ 0.34
ACTN4-211ENST00000589528 ZNF598Q86UK7 904 aaKnown RBP17.18■□□□□ 0.34
ACTN4-211ENST00000589528 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 CRYGNQ8WXF5 182 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 RSPH1Q8WYR4 309 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 ZMYND12Q9H0C1 365 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 GBP3Q9H0R5 595 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 CYP26B1Q9NR63 512 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 INPP5FQ9Y2H2 1132 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
ACTN4-211ENST00000589528 C2orf16Q68DN1 1984 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 GAS7O60861 476 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 CSDE1O75534 798 aaKnown RBP17.17■□□□□ 0.34
ACTN4-211ENST00000589528 DNM2P50570 870 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 CLCN5P51795 746 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
ACTN4-211ENST00000589528 CDC42EP1Q00587 391 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 AKAP17AQ02040 695 aaKnown RBP17.17■□□□□ 0.34
ACTN4-211ENST00000589528 LONRF3Q496Y0 759 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 KANK3Q6NY19 840 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 GLB1LQ6UWU2 654 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 TMC5Q6UXY8 1006 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 FRMD5Q7Z6J6 570 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 DDX53Q86TM3 631 aaKnown RBP17.17■□□□□ 0.34
ACTN4-211ENST00000589528 PPFIBP1Q86W92 1011 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 CHST12Q9NRB3 414 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 FBXL21Q9UKT6 434 aa17.17■□□□□ 0.34
ACTN4-211ENST00000589528 PIN4Q9Y237 131 aaKnown RBP17.17■□□□□ 0.34
ACTN4-211ENST00000589528 ZNF862O60290 1169 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 CTSAP10619 480 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 SFNP31947 248 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 PHKA2P46019 1235 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 JAK3P52333 1124 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 RCAN1P53805 252 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 EXOSC10Q01780 885 aaKnown RBP17.16■□□□□ 0.34
ACTN4-211ENST00000589528 KRT32Q14532 448 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 CCDC149Q6ZUS6 474 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 OTOP3Q7RTS5 596 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 IGSF21Q96ID5 467 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 TEKT3Q9BXF9 490 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 INO80BQ9C086 356 aaPredicted RBP17.16■□□□□ 0.34
ACTN4-211ENST00000589528 SFXN1Q9H9B4 322 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 SEPT9Q9UHD8 586 aaPredicted RBP17.16■□□□□ 0.34
ACTN4-211ENST00000589528 IRAK3Q9Y616 596 aa17.16■□□□□ 0.34
ACTN4-211ENST00000589528 RFX1P22670 979 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 KLRC2P26717 231 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 ADD1P35611 737 aaKnown RBP17.15■□□□□ 0.34
ACTN4-211ENST00000589528 MTERF2Q49AM1 385 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 NOMO2Q5JPE7 1267 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 LRCH2Q5VUJ6 765 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 TMEM173Q86WV6 379 aaPredicted RBP17.15■□□□□ 0.34
ACTN4-211ENST00000589528 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 LPPQ93052 612 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 CCDC136Q96JN2 1154 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 EMILIN2Q9BXX0 1053 aa17.15■□□□□ 0.34
ACTN4-211ENST00000589528 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
ACTN4-211ENST00000589528 STK25O00506 426 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 SSBP05455 408 aaKnown RBP eCLIP17.14■□□□□ 0.33
ACTN4-211ENST00000589528 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
ACTN4-211ENST00000589528 CIITAP33076 1130 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 RAB27AP51159 221 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 TDGQ13569 410 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 UGCGQ16739 394 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 CATSPER4Q7RTX7 472 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 MIER3Q7Z3K6 550 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 ADSSL1Q8N142 457 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 URGCPQ8TCY9 931 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 FAM193BQ96PV7 902 aaPredicted RBP17.14■□□□□ 0.33
ACTN4-211ENST00000589528 RIT2Q99578 217 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 NRDE2Q9H7Z3 1164 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 TBC1D13Q9NVG8 400 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 STK39Q9UEW8 545 aa17.14■□□□□ 0.33
ACTN4-211ENST00000589528 DMDP11532 3685 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms