RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 GOLGA8HP0CJ92 632 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 PCP11498 1178 aaKnown RBP9.6□□□□□ -0.87
DNMT1-219ENST00000589349 AKR1A1P14550 325 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
DNMT1-219ENST00000589349 ADCYAP1R1P41586 468 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 OAZ1P54368 228 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 LRRC26Q2I0M4 334 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 CCDC178Q5BJE1 867 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 SYDE2Q5VT97 1194 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 EEPD1Q7L9B9 569 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 REPS2Q8NFH8 660 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 FANCD2OSQ96PS1 177 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 KRT23Q9C075 422 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 ACSS3Q9H6R3 686 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 VAT1LQ9HCJ6 419 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 FAM184BQ9ULE4 1060 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 DIS3Q9Y2L1 958 aaKnown RBP9.6□□□□□ -0.87
DNMT1-219ENST00000589349 TACC3Q9Y6A5 838 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 PLXNB2O15031 1838 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 PLIN4Q96Q06 1357 aa9.6□□□□□ -0.87
DNMT1-219ENST00000589349 NEDD4P46934 1319 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 ERICH2A1L162 156 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 C6orf222P0C671 652 aaPredicted RBP9.59□□□□□ -0.87
DNMT1-219ENST00000589349 CALML3P27482 149 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 CNTN2Q02246 1040 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 TKFCQ3LXA3 575 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 USH1GQ495M9 461 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 ZC3H12AQ5D1E8 599 aaKnown RBP9.59□□□□□ -0.87
DNMT1-219ENST00000589349 RALYLQ86SE5 291 aaKnown RBP9.59□□□□□ -0.87
DNMT1-219ENST00000589349 TTC14Q96N46 770 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 UBA5Q9GZZ9 404 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 CNNM2Q9H8M5 875 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 BRCA2P51587 3418 aa9.59□□□□□ -0.87
DNMT1-219ENST00000589349 PFASO15067 1338 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 MYH4Q9Y623 1939 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 ATP2A1O14983 1001 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 NFICP08651 508 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 RTP1P59025 263 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 ACVR2BQ13705 512 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 LRRC41Q15345 812 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 IFIT1BQ5T764 474 aaKnown RBP9.58□□□□□ -0.88
DNMT1-219ENST00000589349 ARMCX2Q7L311 632 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 CCDC144CPQ8IYA2 1237 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 DSCC1Q9BVC3 393 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 SEMA6CQ9H3T2 930 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 TCP11L1Q9NUJ3 509 aa9.58□□□□□ -0.88
DNMT1-219ENST00000589349 TNRC18O15417 2968 aaPredicted RBP9.58□□□□□ -0.88
DNMT1-219ENST00000589349 ZMYM6O95789 1325 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 ASB14A6NK59 587 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 IFIT3O14879 490 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 PQBP1O60828 265 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 ICAM1P05362 532 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 PARP1P09874 1014 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 PDHBP11177 359 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 GSPT1P15170 499 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 MAGEA10P43363 369 aaPredicted RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 LIG3P49916 1009 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 CHMP4BP1P59074 171 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 BAATQ14032 418 aaPredicted RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 CCDC144BQ3MJ40 725 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 TRIM60Q495X7 471 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 MUM1L1Q5H9M0 696 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 RASIP1Q5U651 963 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 SLC39A5Q6ZMH5 540 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 MSL3Q8N5Y2 521 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 MPHOSPH6Q99547 160 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 AP5M1Q9H0R1 490 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 CPVLQ9H3G5 476 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 ABHD16BQ9H3Z7 469 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 A1CFQ9NQ94 594 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 DISC1Q9NRI5 854 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 ZSWIM5Q9P217 1185 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 NRBP1Q9UHY1 535 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 RNF112Q9ULX5 631 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 PCDHA4Q9UN74 947 aa9.57□□□□□ -0.88
DNMT1-219ENST00000589349 MKI67P46013 3256 aaKnown RBP9.57□□□□□ -0.88
DNMT1-219ENST00000589349 TNKSO95271 1327 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 COL11A1P12107 1806 aaPredicted RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 PLA2G6O60733 806 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 SNAI1O95863 264 aaPredicted RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 FGRP09769 529 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 COL6A1P12109 1028 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 ZNF16P17020 682 aaPredicted RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 CHMLP26374 656 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 TNFAIP2Q03169 654 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 ZNF543Q08ER8 600 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 SART3Q15020 963 aaKnown RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 KCNA10Q16322 511 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 GPATCH4Q5T3I0 446 aaKnown RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 CASC1Q6TDU7 716 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 AGMOQ6ZNB7 445 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 RNF207Q6ZRF8 634 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 CHST3Q7LGC8 479 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 DGKHQ86XP1 1220 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 NUP133Q8WUM0 1156 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 PIBF1Q8WXW3 757 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 MFSD14AQ96MC6 490 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 STARD7Q9NQZ5 370 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms