RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 KCNK18Q7Z418 384 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 ZNF410Q86VK4 478 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 SNX29Q8TEQ0 813 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 PSPC1Q8WXF1 523 aaKnown RBP11□□□□□ -0.65
PTPN2-208ENST00000589216 BSNDQ8WZ55 320 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 MMTAG2Q9BU76 263 aaKnown RBP11□□□□□ -0.65
PTPN2-208ENST00000589216 POLR3CQ9BUI4 534 aaPredicted RBP11□□□□□ -0.65
PTPN2-208ENST00000589216 GCOM2Q9BZD3 368 aaPredicted RBP11□□□□□ -0.65
PTPN2-208ENST00000589216 POLR3FQ9H1D9 316 aaPredicted RBP11□□□□□ -0.65
PTPN2-208ENST00000589216 ATP6V0A4Q9HBG4 840 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 ANKEF1Q9NU02 776 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 PPME1Q9Y570 386 aa11□□□□□ -0.65
PTPN2-208ENST00000589216 MEIS3P2A8K0S8 358 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 SRGAP2CP0DJJ0 459 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 SYT1P21579 422 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 GLRA2P23416 452 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 RPA1P27694 616 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 CTNNB1P35222 781 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 CCT6AP40227 531 aaKnown RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 PRPHP41219 470 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 DNM2P50570 870 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 GRIN1Q05586 938 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 RESTQ13127 1097 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 BTG3Q14201 252 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 CLLU1OSQ5K130 101 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 SLC24A5Q71RS6 500 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 OTUD6AQ7L8S5 288 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 TMEM192Q8IY95 271 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 CMTR2Q8IYT2 770 aaKnown RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 FIBCD1Q8N539 461 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 RNF149Q8NC42 400 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 LRRC15Q8TF66 581 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 CCDC43Q96MW1 224 aaKnown RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 JPH2Q9BR39 696 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 C1orf112Q9NSG2 853 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 DDX19AQ9NUU7 478 aaKnown RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 LRWD1Q9UFC0 647 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 DBR1Q9UK59 544 aaKnown RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 PIN4Q9Y237 131 aaKnown RBP10.99□□□□□ -0.65
PTPN2-208ENST00000589216 VCANP13611 3396 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 MYH11P35749 1972 aa10.99□□□□□ -0.65
PTPN2-208ENST00000589216 XIRP2A4UGR9 3374 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 BDP1A6H8Y1 2624 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 VWA3AA6NCI4 1184 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 LAD1O00515 517 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 GAS2O43903 313 aaKnown RBP10.98□□□□□ -0.65
PTPN2-208ENST00000589216 DGAT1O75907 488 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 CSPG5O95196 566 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 STAG3L1P0CL83 205 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 POU3F3P20264 500 aaPredicted RBP10.98□□□□□ -0.65
PTPN2-208ENST00000589216 SFPQP23246 707 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTPN2-208ENST00000589216 ARL2P36404 184 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 FAM189BP81408 668 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 AMHR2Q16671 573 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 HAUS3Q68CZ6 603 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 MAEAQ7L5Y9 396 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 CATSPER4Q7RTX7 472 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 ZNF598Q86UK7 904 aaKnown RBP10.98□□□□□ -0.65
PTPN2-208ENST00000589216 ECHDC2Q86YB7 292 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 RNF169Q8NCN4 708 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 ERMNQ8TAM6 284 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 CLP1Q92989 425 aaKnown RBP10.98□□□□□ -0.65
PTPN2-208ENST00000589216 LPPQ93052 612 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 SNX21Q969T3 373 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 INTS4Q96HW7 963 aaKnown RBP10.98□□□□□ -0.65
PTPN2-208ENST00000589216 POLD4Q9HCU8 107 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 AGPAT5Q9NUQ2 364 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 TMEM161AQ9NX61 479 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 LRFN2Q9ULH4 789 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 MTMR6Q9Y217 621 aa10.98□□□□□ -0.65
PTPN2-208ENST00000589216 TBKBP1A7MCY6 615 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 E9PMD0 336 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 GRM6O15303 877 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 TSPAN1O60635 241 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 EDN1P05305 212 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 PHKA2P46019 1235 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 MBTD1Q05BQ5 628 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 LONRF3Q496Y0 759 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 UBXN11Q5T124 520 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 BRAPQ7Z569 592 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 SLC17A8Q8NDX2 589 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 HELQQ8TDG4 1101 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 TCP11Q8WWU5 503 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 PNMA5Q96PV4 448 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 BHMT2Q9H2M3 363 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 PCDHB7Q9Y5E2 793 aa10.97□□□□□ -0.65
PTPN2-208ENST00000589216 A0A0U1RQF3 1178 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 ARHGEF35A5YM69 484 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 TTLL13PA6NNM8 815 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 C5orf67F2Z3F1 127 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 H3BNC9 293 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 B4GALT5O43286 388 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
PTPN2-208ENST00000589216 B4GALT3O60512 393 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms