RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 TRMT13Q9NUP7 481 aaKnown RBP18.74■□□□□ 0.59
SCAMP4-211ENST00000588907 TRIP12Q14669 1992 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 RSPH10B2B2RC85 870 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 KLRC4O43908 158 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 CD4P01730 458 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 RSPH10BP0C881 870 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 GLRA2P23416 452 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 PHKA2P46019 1235 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 ATN1P54259 1190 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 PEX3P56589 373 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 ZNF200P98182 395 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 EHHADHQ08426 723 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 MKRN4PQ13434 485 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 KMT5BQ4FZB7 885 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 RUFY4Q6ZNE9 571 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 FAM43BQ6ZT52 329 aaPredicted RBP18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 RHPN2Q8IUC4 686 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 ZBTB8OSQ8IWT0 167 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 DNAJB3Q8WWF6 145 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 HVCN1Q96D96 273 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 ST6GALNAC4Q9H4F1 302 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 MRPL44Q9H9J2 332 aaKnown RBP18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 KMT5AQ9NQR1 393 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 UBE4BO95155 1302 aa18.73■□□□□ 0.59
SCAMP4-211ENST00000588907 DNAH12Q6ZR08 3092 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 CCDC169A6NNP5 214 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 PITPNM1O00562 1244 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 PQBP1O60828 265 aaKnown RBP18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 CASP1P29466 404 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 NPTX2P47972 431 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 ZNF658Q5TYW1 1059 aaPredicted RBP18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 SASS6Q6UVJ0 657 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 SFR1Q86XK3 245 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 DEPTORQ8TB45 409 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 ASAP3Q8TDY4 903 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 SCLT1Q96NL6 688 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 INO80BQ9C086 356 aaPredicted RBP18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 PCDHB13Q9Y5F0 798 aa18.72■□□□□ 0.59
SCAMP4-211ENST00000588907 LRRIQ4A6NIV6 560 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 K7ENM7 598 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 EIF3DO15371 548 aaKnown RBP eCLIP18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 PARNO95453 639 aaKnown RBP18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 GPC3P51654 580 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 NCKAP1LP55160 1127 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 SOX10P56693 466 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 MRPS6P82932 125 aaKnown RBP18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 DRP2Q13474 957 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 STIM1Q13586 685 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 CAPSQ13938 189 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 TRIM60Q495X7 471 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 CDCA2Q69YH5 1023 aaPredicted RBP18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 SRGAP1Q7Z6B7 1085 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 IFNLR1Q8IU57 520 aaPredicted RBP18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 RNF149Q8NC42 400 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 PPP1R13LQ8WUF5 828 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 NLRP7Q8WX94 980 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 NLRP4Q96MN2 994 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 GCOM2Q9BZD3 368 aaPredicted RBP18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 TRPV6Q9H1D0 765 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 ARHGAP28Q9P2N2 729 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 DACH1Q9UI36 760 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 MAN1B1Q9UKM7 699 aa18.71■□□□□ 0.59
SCAMP4-211ENST00000588907 SFI1A8K8P3 1242 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 VTNP04004 478 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 THPOP40225 353 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 CRYBB1P53674 252 aaPredicted RBP18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 NLRP11P59045 1033 aaKnown RBP18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 COBLL1Q53SF7 1204 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 USP38Q8NB14 1042 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 ZBTB10Q96DT7 871 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 HTATIP2Q9BUP3 242 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 TMEM134Q9H6X4 195 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 TRPV2Q9Y5S1 764 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 SQORQ9Y6N5 450 aa18.7■□□□□ 0.58
SCAMP4-211ENST00000588907 GPR32O75388 356 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 CLTBP09497 229 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 SRGAP2CP0DJJ0 459 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 PTENP60484 403 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 TLE2Q04725 743 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 MORC3Q14149 939 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 ZSCAN23Q3MJ62 389 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 CT47A1Q5JQC4 288 aaPredicted RBP18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 FAM26DQ5JW98 314 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 ZNF720Q7Z2F6 126 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 TMEM161BQ8NDZ6 487 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 BSNDQ8WZ55 320 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 CELF4Q9BZC1 486 aaKnown RBP18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 EXOC7Q9UPT5 735 aa18.69■□□□□ 0.58
SCAMP4-211ENST00000588907 CCDC85CA6NKD9 419 aa18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 GCNT3O95395 438 aa18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 CCDC192P0DO97 292 aa18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 CKBP12277 381 aa18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 SFPQP23246 707 aaKnown RBP eCLIP18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 GTF2BQ00403 316 aa18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 FAAP100Q0VG06 881 aa18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 STRN3Q13033 797 aa18.68■□□□□ 0.58
SCAMP4-211ENST00000588907 STX1AQ16623 288 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms