RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FANCLQ9NW38 375 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 NFE2L3Q9Y4A8 694 aa12.47□□□□□ -0.41
VMP1-207ENST00000588131 UBE4BO95155 1302 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 HAX1O00165 279 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 GAS2O43903 313 aaKnown RBP12.46□□□□□ -0.41
VMP1-207ENST00000588131 ZEB2O60315 1214 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 ASGR1P07306 291 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 GJB1P08034 283 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 LBX1P52954 281 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 CAPSQ13938 189 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 KCNA10Q16322 511 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 ZCWPW2Q504Y3 356 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 HSP90AA4PQ58FG1 418 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 IER5Q5VY09 327 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 TMEM161BQ8NDZ6 487 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 TCP11Q8WWU5 503 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 PRPF31Q8WWY3 499 aaKnown RBP12.46□□□□□ -0.41
VMP1-207ENST00000588131 IFT74Q96LB3 600 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 JPH2Q9BR39 696 aaPredicted RBP12.46□□□□□ -0.41
VMP1-207ENST00000588131 NTPCRQ9BSD7 190 aaKnown RBP12.46□□□□□ -0.41
VMP1-207ENST00000588131 ST6GALNAC4Q9H4F1 302 aa12.46□□□□□ -0.41
VMP1-207ENST00000588131 SAMSN1Q9NSI8 373 aaKnown RBP12.46□□□□□ -0.41
VMP1-207ENST00000588131 SUCLA2Q9P2R7 463 aaPredicted RBP12.46□□□□□ -0.41
VMP1-207ENST00000588131 SCN10AQ9Y5Y9 1956 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 NRCAMQ92823 1304 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 BICDL2A1A5D9 508 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 RRN3P2A6NIE6 340 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 MAGEB2O15479 319 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 MSCO60682 206 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 KIF20AO95235 890 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 MYCP01106 439 aaPredicted RBP12.45□□□□□ -0.42
VMP1-207ENST00000588131 ATP1A3P13637 1013 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 NAMPTP43490 491 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 ZNF200P98182 395 aaPredicted RBP12.45□□□□□ -0.42
VMP1-207ENST00000588131 GTF2BQ00403 316 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 MTFR1Q15390 333 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 KNOP1Q1ED39 458 aaKnown RBP12.45□□□□□ -0.42
VMP1-207ENST00000588131 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 CTU1Q7Z7A3 348 aaKnown RBP12.45□□□□□ -0.42
VMP1-207ENST00000588131 RNF180Q86T96 592 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 PSPC1Q8WXF1 523 aaKnown RBP12.45□□□□□ -0.42
VMP1-207ENST00000588131 HDAC6Q9UBN7 1215 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 PCDHB13Q9Y5F0 798 aa12.45□□□□□ -0.42
VMP1-207ENST00000588131 DENND3A2RUS2 1198 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 MBLAC1A4D2B0 266 aaPredicted RBP12.44□□□□□ -0.42
VMP1-207ENST00000588131 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 TGFB1I1O43294 461 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 ZNF18P17022 549 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 HOXC8P31273 242 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 SMTNP53814 917 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 TPM4P67936 248 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 ADAM17P78536 824 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 LRRC63Q05C16 580 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 LAMTOR4Q0VGL1 99 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 ALCAMQ13740 583 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 PPP2R5AQ15172 486 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
VMP1-207ENST00000588131 NBPF20Q3BBV1 942 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 CDKAL1Q5VV42 579 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 NFRKBQ6P4R8 1299 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 RUFY4Q6ZNE9 571 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 TAS1R3Q7RTX0 852 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 RHPN2Q8IUC4 686 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 C7orf31Q8N865 590 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 PCSK9Q8NBP7 692 aaKnown RBP12.44□□□□□ -0.42
VMP1-207ENST00000588131 SLC17A8Q8NDX2 589 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 ZNF668Q96K58 619 aaPredicted RBP12.44□□□□□ -0.42
VMP1-207ENST00000588131 TSG101Q99816 390 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 SRRTQ9BXP5 876 aaKnown RBP12.44□□□□□ -0.42
VMP1-207ENST00000588131 PAK6Q9NQU5 681 aaPredicted RBP12.44□□□□□ -0.42
VMP1-207ENST00000588131 ARHGAP28Q9P2N2 729 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 EVPLQ92817 2033 aa12.44□□□□□ -0.42
VMP1-207ENST00000588131 GRIN2DO15399 1336 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 C17orf102A2RUQ5 167 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 TISP43B9A030 160 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 PDXKO00764 312 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 TREHO43280 583 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 VTNP04004 478 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 EDN1P05305 212 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 SRGAP2CP0DJJ0 459 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 CCL5P13501 91 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
VMP1-207ENST00000588131 DNM2P50570 870 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 ACLYP53396 1101 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 PLCB2Q00722 1185 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 MXD4Q14582 209 aaPredicted RBP12.43□□□□□ -0.42
VMP1-207ENST00000588131 FOXR2Q6PJQ5 311 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 LRRC55Q6ZSA7 311 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 IRF2BP1Q8IU81 584 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 MAP4K3Q8IVH8 894 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 KIAA0319LQ8IZA0 1049 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 CSGALNACT2Q8N6G5 542 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 DEPTORQ8TB45 409 aa12.43□□□□□ -0.42
VMP1-207ENST00000588131 HVCN1Q96D96 273 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms