RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 GCOM2Q9BZD3 368 aaPredicted RBP21.07■□□□□ 0.96
TRIM47-205ENST00000587774 CLEC1BQ9P126 229 aa21.07■□□□□ 0.96
TRIM47-205ENST00000587774 WRAP73Q9P2S5 460 aaPredicted RBP21.07■□□□□ 0.96
TRIM47-205ENST00000587774 PLXNA3P51805 1871 aa21.07■□□□□ 0.96
TRIM47-205ENST00000587774 MYO10Q9HD67 2058 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 TECTAO75443 2155 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 A0A0U1RQF3 1178 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 FDPSP14324 419 aaKnown RBP21.06■□□□□ 0.96
TRIM47-205ENST00000587774 PBX3P40426 434 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 QARSP47897 775 aaKnown RBP21.06■□□□□ 0.96
TRIM47-205ENST00000587774 DNM2P50570 870 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 ZNF598Q86UK7 904 aaKnown RBP21.06■□□□□ 0.96
TRIM47-205ENST00000587774 RHPN2Q8IUC4 686 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 KSR1Q8IVT5 923 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 MICAL1Q8TDZ2 1067 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 HAS1Q92839 578 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 GTF3C6Q969F1 213 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 CYP26B1Q9NR63 512 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 DACT1Q9NYF0 836 aa21.06■□□□□ 0.96
TRIM47-205ENST00000587774 SUCLA2Q9P2R7 463 aaPredicted RBP21.06■□□□□ 0.96
TRIM47-205ENST00000587774 BARX2Q9UMQ3 279 aaPredicted RBP21.06■□□□□ 0.96
TRIM47-205ENST00000587774 KMT2EQ8IZD2 1858 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 TRIP11Q15643 1979 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 NPEPPSP55786 919 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
TRIM47-205ENST00000587774 NR5A1Q13285 461 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 ME3Q16798 604 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 KCNT2Q6UVM3 1135 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 ZNF410Q86VK4 478 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 SMRP1Q8NCR6 262 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 HELQQ8TDG4 1101 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 WASF1Q92558 559 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 NLRP4Q96MN2 994 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 TLE6Q9H808 572 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 MUC6Q6W4X9 2439 aa21.05■□□□□ 0.96
TRIM47-205ENST00000587774 MTCL1Q9Y4B5 1905 aaKnown RBP21.04■□□□□ 0.96
TRIM47-205ENST00000587774 FSCN2O14926 492 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 PER2O15055 1255 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 TBX3O15119 743 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 EYA4O95677 639 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 SFPQP23246 707 aaKnown RBP eCLIP21.04■□□□□ 0.96
TRIM47-205ENST00000587774 KRT2P35908 639 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 CDC42EP1Q00587 391 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 PLCB3Q01970 1234 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 PLPP4Q5VZY2 271 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 ZNF579Q8NAF0 562 aaKnown RBP21.04■□□□□ 0.96
TRIM47-205ENST00000587774 VN1R2Q8NFZ6 395 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 MRPS27Q92552 414 aaKnown RBP21.04■□□□□ 0.96
TRIM47-205ENST00000587774 TNFRSF25Q93038 417 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 ZNF558Q96NG5 402 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 POP1Q99575 1024 aaKnown RBP21.04■□□□□ 0.96
TRIM47-205ENST00000587774 NAP1L4Q99733 375 aaKnown RBP21.04■□□□□ 0.96
TRIM47-205ENST00000587774 LXNQ9BS40 222 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 LZTS1Q9Y250 596 aa21.04■□□□□ 0.96
TRIM47-205ENST00000587774 DCXO43602 365 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 EOMESO95936 686 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 P4HBP07237 508 aaKnown RBP21.03■□□□□ 0.96
TRIM47-205ENST00000587774 ALADP13716 330 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 PPM1AP35813 382 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 SPIRE1Q08AE8 756 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 COASYQ13057 564 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 DUSP6Q16828 381 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 TWF2Q6IBS0 349 aaKnown RBP21.03■□□□□ 0.96
TRIM47-205ENST00000587774 NCAPH2Q6IBW4 605 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 SLC7A3Q8WY07 619 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 TCF25Q9BQ70 676 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 JPH2Q9BR39 696 aaPredicted RBP21.03■□□□□ 0.96
TRIM47-205ENST00000587774 ENTPD7Q9NQZ7 604 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 CHST12Q9NRB3 414 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 PIN4Q9Y237 131 aaKnown RBP21.03■□□□□ 0.96
TRIM47-205ENST00000587774 MYH11P35749 1972 aa21.03■□□□□ 0.96
TRIM47-205ENST00000587774 DKC1O60832 514 aaKnown RBP eCLIP21.02■□□□□ 0.96
TRIM47-205ENST00000587774 PHKA2P46019 1235 aa21.02■□□□□ 0.96
TRIM47-205ENST00000587774 POLGP54098 1239 aaPredicted RBP21.02■□□□□ 0.96
TRIM47-205ENST00000587774 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.96
TRIM47-205ENST00000587774 PDE12Q6L8Q7 609 aaKnown RBP21.02■□□□□ 0.96
TRIM47-205ENST00000587774 NSUN7Q8NE18 718 aaKnown RBP21.02■□□□□ 0.96
TRIM47-205ENST00000587774 CEP170P1Q96L14 293 aa21.02■□□□□ 0.96
TRIM47-205ENST00000587774 MRPL9Q9BYD2 267 aaKnown RBP21.02■□□□□ 0.96
TRIM47-205ENST00000587774 DHX33Q9H6R0 707 aaKnown RBP21.02■□□□□ 0.96
TRIM47-205ENST00000587774 IFT122Q9HBG6 1241 aa21.02■□□□□ 0.96
TRIM47-205ENST00000587774 BMP2KQ9NSY1 1161 aaPredicted RBP21.02■□□□□ 0.96
TRIM47-205ENST00000587774 RGL1Q9NZL6 768 aa21.02■□□□□ 0.96
TRIM47-205ENST00000587774 HCN4Q9Y3Q4 1203 aa21.02■□□□□ 0.96
TRIM47-205ENST00000587774 COL4A3BPQ9Y5P4 624 aa21.02■□□□□ 0.96
TRIM47-205ENST00000587774 FSD2A1L4K1 749 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 MARCH6O60337 910 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 YWHABP31946 246 aaKnown RBP21.01■□□□□ 0.95
TRIM47-205ENST00000587774 FOSBP53539 338 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 EPHA7Q15375 998 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 C4orf19Q8IY42 314 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 LPPQ93052 612 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 CDCA3Q99618 268 aaPredicted RBP21.01■□□□□ 0.95
TRIM47-205ENST00000587774 TRAIPQ9BWF2 469 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 INO80BQ9C086 356 aaPredicted RBP21.01■□□□□ 0.95
TRIM47-205ENST00000587774 BRMS1Q9HCU9 246 aa21.01■□□□□ 0.95
TRIM47-205ENST00000587774 MEIS3P2A8K0S8 358 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 HIDE1A8MVS5 230 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 PRR33A8MZF0 331 aa21■□□□□ 0.95
TRIM47-205ENST00000587774 JAK2O60674 1132 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms