RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 RIMBP2O15034 1052 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 P4HA2O15460 535 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 FGGP02679 453 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 NUDT17P0C025 328 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 TNFAIP3P21580 790 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 SMTNP53814 917 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 DR1Q01658 176 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 IFFO1Q0D2I5 559 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 KIF22Q14807 665 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 DRAP1Q14919 205 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-206ENST00000587730 C1orf186Q6ZWK4 172 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 UBL4BQ8N7F7 174 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 LNX1Q8TBB1 728 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-206ENST00000587730 TMEM174Q8WUU8 243 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 KAT2BQ92831 832 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 NACC1Q96RE7 527 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 ERP44Q9BS26 406 aa20.14■□□□□ 0.81
DDX39A-206ENST00000587730 STMN4Q9H169 189 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-206ENST00000587730 A1CFQ9NQ94 594 aaKnown RBP20.14■□□□□ 0.81
DDX39A-206ENST00000587730 TTI1O43156 1089 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 RAD21O60216 631 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 BYSLQ13895 437 aaKnown RBP20.13■□□□□ 0.81
DDX39A-206ENST00000587730 PLS1Q14651 629 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 KRT71Q3SY84 523 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 PODNQ7Z5L7 613 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 NEK9Q8TD19 979 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 TACO1Q9BSH4 297 aaKnown RBP20.13■□□□□ 0.81
DDX39A-206ENST00000587730 WDR11Q9BZH6 1224 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 INTS2Q9H0H0 1204 aaKnown RBP20.13■□□□□ 0.81
DDX39A-206ENST00000587730 DNAJC18Q9H819 358 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 ZMYM2Q9UBW7 1377 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 CCDC169A6NNP5 214 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 POLRMTO00411 1230 aaKnown RBP20.13■□□□□ 0.81
DDX39A-206ENST00000587730 PODXLO00592 558 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 CLIC2O15247 247 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 DDX3YO15523 660 aaKnown RBP20.13■□□□□ 0.81
DDX39A-206ENST00000587730 BMP3P12645 472 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 MYL7Q01449 175 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 IKQ13123 557 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-206ENST00000587730 RNF187Q5TA31 235 aaPredicted RBP20.13■□□□□ 0.81
DDX39A-206ENST00000587730 DUPD1Q68J44 220 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 CCDC50Q8IVM0 306 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 GLYCTKQ8IVS8 523 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 TXLNGYQ9BZA5 131 aa20.13■□□□□ 0.81
DDX39A-206ENST00000587730 RSPH10B2B2RC85 870 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 RSPH10BP0C881 870 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 ITGA4P13612 1032 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 SCNN1DP51172 638 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 CYP4A11Q02928 519 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 ABCB5Q2M3G0 1257 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 GKAP1Q5VSY0 366 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-206ENST00000587730 ZNF720Q7Z2F6 126 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 DDX42Q86XP3 938 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDX39A-206ENST00000587730 FAM178BQ8IXR5 827 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 CACNA2D3Q8IZS8 1091 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 TLCD1Q96CP7 247 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 PGM2Q96G03 612 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 NEUROG2Q9H2A3 272 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 GOLPH3Q9H4A6 298 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 KCNQ5Q9NR82 932 aa20.12■□□□□ 0.81
DDX39A-206ENST00000587730 AJAP1Q9UKB5 411 aaPredicted RBP20.12■□□□□ 0.81
DDX39A-206ENST00000587730 NDUFB10O96000 172 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 NPR1P16066 1061 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 CHRNA3P32297 505 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 PRELPP51888 382 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 SEC24CP53992 1094 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 NFIAQ12857 509 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 LRCH2Q5VUJ6 765 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 OTOP1Q7RTM1 612 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 CCDC91Q7Z6B0 441 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 SLC5A5Q92911 643 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 RPS6KC1Q96S38 1066 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 PPANQ9NQ55 473 aaKnown RBP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 AGPAT3Q9NRZ7 376 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 CNOT7Q9UIV1 285 aaKnown RBP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 IGLV3-22A0A075B6J6 115 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 PSMD10O75832 226 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 MAPTP10636 758 aaKnown RBP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 KRT13P13646 458 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 RPAINQ86UA6 219 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 P2RX7Q99572 595 aaKnown RBP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 TAOK3Q9H2K8 898 aa20.11■□□□□ 0.81
DDX39A-206ENST00000587730 PABPC3Q9H361 631 aaKnown RBP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 BCCIPQ9P287 314 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 MTRF1LQ9UGC7 380 aaKnown RBP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 NOVA2Q9UNW9 492 aaKnown RBP20.11■□□□□ 0.81
DDX39A-206ENST00000587730 COL2A1P02458 1487 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-206ENST00000587730 SNRPFP62306 86 aaKnown RBP20.1■□□□□ 0.81
DDX39A-206ENST00000587730 IFT88Q13099 833 aa20.1■□□□□ 0.81
DDX39A-206ENST00000587730 USH1GQ495M9 461 aa20.1■□□□□ 0.81
DDX39A-206ENST00000587730 INTS8Q75QN2 995 aaKnown RBP20.1■□□□□ 0.81
DDX39A-206ENST00000587730 OLIG1Q8TAK6 271 aa20.1■□□□□ 0.81
DDX39A-206ENST00000587730 EML1O00423 815 aa20.09■□□□□ 0.81
DDX39A-206ENST00000587730 PHF2O75151 1096 aa20.09■□□□□ 0.81
DDX39A-206ENST00000587730 SLITRK3O94933 977 aa20.09■□□□□ 0.81
DDX39A-206ENST00000587730 MNAT1P51948 309 aa20.09■□□□□ 0.81
DDX39A-206ENST00000587730 MAGOHP61326 146 aaKnown RBP20.09■□□□□ 0.81
DDX39A-206ENST00000587730 BFSP1Q12934 665 aa20.09■□□□□ 0.81
DDX39A-206ENST00000587730 MAPK7Q13164 816 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms