RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 PCDHGC5Q9Y5F6 944 aa18.01■□□□□ 0.47
CXXC1-209ENST00000587342 LYPLA2O95372 231 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 KCNA5P22460 613 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 GTF2F1P35269 517 aaKnown RBP eCLIP18■□□□□ 0.47
CXXC1-209ENST00000587342 IRS1P35568 1242 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 RFC5P40937 340 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 DNM2P50570 870 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 POLGP54098 1239 aaPredicted RBP18■□□□□ 0.47
CXXC1-209ENST00000587342 SAFBQ15424 915 aaKnown RBP eCLIP18■□□□□ 0.47
CXXC1-209ENST00000587342 XKR9Q5GH70 373 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 NOSTRINQ8IVI9 506 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 SPPL3Q8TCT6 385 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 PRPF31Q8WWY3 499 aaKnown RBP18■□□□□ 0.47
CXXC1-209ENST00000587342 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 P2RX5Q93086 422 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 LMAN2LQ9H0V9 348 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 TYW1Q9NV66 732 aaKnown RBP18■□□□□ 0.47
CXXC1-209ENST00000587342 COL4A3BPQ9Y5P4 624 aa18■□□□□ 0.47
CXXC1-209ENST00000587342 DKC1O60832 514 aaKnown RBP eCLIP17.99■□□□□ 0.47
CXXC1-209ENST00000587342 SPATA31C1P0DKV0 1188 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 LAMTOR4Q0VGL1 99 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 HYAL1Q12794 435 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 ZNF174Q15697 407 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 AAK1Q2M2I8 961 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 ADGRD2Q7Z7M1 963 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 RNF169Q8NCN4 708 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 TBC1D32Q96NH3 1257 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 TMEM117Q9H0C3 514 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 PPME1Q9Y570 386 aa17.99■□□□□ 0.47
CXXC1-209ENST00000587342 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 MEIS3P2A8K0S8 358 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 MED24O75448 989 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 ZSCAN20P17040 1043 aaPredicted RBP17.98■□□□□ 0.47
CXXC1-209ENST00000587342 SFPQP23246 707 aaKnown RBP eCLIP17.98■□□□□ 0.47
CXXC1-209ENST00000587342 PBX3P40426 434 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 TOB1P50616 345 aaPredicted RBP17.98■□□□□ 0.47
CXXC1-209ENST00000587342 TTC38Q5R3I4 469 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 C4orf32Q8N8J7 132 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 FAM184AQ8NB25 1140 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 COLGALT1Q8NBJ5 622 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.98■□□□□ 0.47
CXXC1-209ENST00000587342 ASAP3Q8TDY4 903 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 PIGOQ8TEQ8 1089 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 PSPC1Q8WXF1 523 aaKnown RBP17.98■□□□□ 0.47
CXXC1-209ENST00000587342 TMX3Q96JJ7 454 aa17.98■□□□□ 0.47
CXXC1-209ENST00000587342 JPH2Q9BR39 696 aaPredicted RBP17.98■□□□□ 0.47
CXXC1-209ENST00000587342 PIN4Q9Y237 131 aaKnown RBP17.98■□□□□ 0.47
CXXC1-209ENST00000587342 H3BQ06 376 aaPredicted RBP17.97■□□□□ 0.47
CXXC1-209ENST00000587342 TNFRSF10AO00220 468 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 LINC01565O15544 149 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 OR52Z1P0C646 297 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 SRGAP2CP0DJJ0 459 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 U2AF2P26368 475 aaKnown RBP eCLIP17.97■□□□□ 0.47
CXXC1-209ENST00000587342 LTBRP36941 435 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 PHKA2P46019 1235 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 RARRES1P49788 294 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 CDC42EP1Q00587 391 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 DLX2Q07687 328 aaPredicted RBP17.97■□□□□ 0.47
CXXC1-209ENST00000587342 LEXMQ3ZCV2 418 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 OTUD6AQ7L8S5 288 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 FERMT3Q86UX7 667 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 NEK9Q8TD19 979 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 HELQQ8TDG4 1101 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 POF1BQ8WVV4 589 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 LPPQ93052 612 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 AGPAT5Q9NUQ2 364 aa17.97■□□□□ 0.47
CXXC1-209ENST00000587342 CTC1Q2NKJ3 1217 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 LONRF3Q496Y0 759 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 NAALADL2Q58DX5 795 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 POTEGQ6S5H5 508 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 CATSPER3Q86XQ3 398 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 IL27Q8NEV9 243 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 PABPC5Q96DU9 382 aaKnown RBP17.96■□□□□ 0.47
CXXC1-209ENST00000587342 MTRQ99707 1265 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 TRAIPQ9BWF2 469 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 CHST12Q9NRB3 414 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 ANKEF1Q9NU02 776 aa17.96■□□□□ 0.47
CXXC1-209ENST00000587342 ST18O60284 1047 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 TBX10O75333 385 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 FGF18O76093 207 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 HOXA11P31270 313 aaPredicted RBP17.95■□□□□ 0.46
CXXC1-209ENST00000587342 TECP42680 631 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 ORC2Q13416 577 aaPredicted RBP17.95■□□□□ 0.46
CXXC1-209ENST00000587342 UBXN11Q5T124 520 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 SPOUT1Q5T280 376 aaKnown RBP17.95■□□□□ 0.46
CXXC1-209ENST00000587342 TWF2Q6IBS0 349 aaKnown RBP17.95■□□□□ 0.46
CXXC1-209ENST00000587342 LRRC43Q8N309 656 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 RNF149Q8NC42 400 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 RNF216Q9NWF9 866 aaPredicted RBP17.95■□□□□ 0.46
CXXC1-209ENST00000587342 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 PCDHB6Q9Y5E3 794 aa17.95■□□□□ 0.46
CXXC1-209ENST00000587342 HOXA2O43364 376 aa17.94■□□□□ 0.46
CXXC1-209ENST00000587342 GAS2O43903 313 aaKnown RBP17.94■□□□□ 0.46
CXXC1-209ENST00000587342 B4GALT3O60512 393 aa17.94■□□□□ 0.46
CXXC1-209ENST00000587342 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
CXXC1-209ENST00000587342 IL9P15248 144 aa17.94■□□□□ 0.46
CXXC1-209ENST00000587342 LAG3P18627 525 aa17.94■□□□□ 0.46
CXXC1-209ENST00000587342 GLRA2P23416 452 aa17.94■□□□□ 0.46
CXXC1-209ENST00000587342 ARL2P36404 184 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms