RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 LYPLA2O95372 231 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 BMP1P13497 986 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 ORC2Q13416 577 aaPredicted RBP19.75■□□□□ 0.75
TPM4-206ENST00000587201 TTC38Q5R3I4 469 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 CATSPER4Q7RTX7 472 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 KLHL23Q8NBE8 558 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 PRPF31Q8WWY3 499 aaKnown RBP19.75■□□□□ 0.75
TPM4-206ENST00000587201 CCDC43Q96MW1 224 aaKnown RBP19.75■□□□□ 0.75
TPM4-206ENST00000587201 MTRQ99707 1265 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 TMEM117Q9H0C3 514 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 AAASQ9NRG9 546 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 TYW1Q9NV66 732 aaKnown RBP19.75■□□□□ 0.75
TPM4-206ENST00000587201 NOL7Q9UMY1 257 aaKnown RBP19.75■□□□□ 0.75
TPM4-206ENST00000587201 KIF3AQ9Y496 699 aa19.75■□□□□ 0.75
TPM4-206ENST00000587201 ITGB1P05556 798 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 OR52Z1P0C646 297 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 SRGAP2CP0DJJ0 459 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 ABI1Q8IZP0 508 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 TMX3Q96JJ7 454 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 UHRF1Q96T88 793 aaPredicted RBP19.74■□□□□ 0.75
TPM4-206ENST00000587201 ANKEF1Q9NU02 776 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 PIN4Q9Y237 131 aaKnown RBP19.74■□□□□ 0.75
TPM4-206ENST00000587201 PCDHB12Q9Y5F1 795 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 REV3LO60673 3130 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 XIRP2A4UGR9 3374 aa19.74■□□□□ 0.75
TPM4-206ENST00000587201 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.73■□□□□ 0.75
TPM4-206ENST00000587201 A0A0U1RQF3 1178 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 ASAP2O43150 1006 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 TECP42680 631 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 TRAPPC10P48553 1259 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 LAMTOR4Q0VGL1 99 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 TWF2Q6IBS0 349 aaKnown RBP19.73■□□□□ 0.75
TPM4-206ENST00000587201 EP400NLQ6ZTU2 488 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 SPPL3Q8TCT6 385 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 PIGOQ8TEQ8 1089 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 POF1BQ8WVV4 589 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 IFT122Q9HBG6 1241 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 HCSTQ9UBK5 93 aa19.73■□□□□ 0.75
TPM4-206ENST00000587201 KIAA1671Q9BY89 1806 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 DGAT1O75907 488 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 CD2BP2O95400 341 aaKnown RBP19.72■□□□□ 0.75
TPM4-206ENST00000587201 EOMESO95936 686 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 KCNA5P22460 613 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 U2AF2P26368 475 aaKnown RBP eCLIP19.72■□□□□ 0.753e-8■□□□□ 9.8
TPM4-206ENST00000587201 MCM2P49736 904 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 FNDC1Q4ZHG4 1894 aaPredicted RBP19.72■□□□□ 0.75
TPM4-206ENST00000587201 SRGAP1Q7Z6B7 1085 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 FERMT3Q86UX7 667 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 TBC1D32Q96NH3 1257 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 CASD1Q96PB1 797 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 CWH43Q9H720 699 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 TUFT1Q9NNX1 390 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 XPNPEP1Q9NQW7 623 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 RNF19AQ9NV58 838 aa19.72■□□□□ 0.75
TPM4-206ENST00000587201 A0A087WWV3 80 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 TNFRSF10AO00220 468 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 LAG3P18627 525 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 DNAJB1P25685 340 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 PHKA2P46019 1235 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 RARRES1P49788 294 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 CAMK1Q14012 370 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 NBR1Q14596 966 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 ZNF598Q86UK7 904 aaKnown RBP19.71■□□□□ 0.75
TPM4-206ENST00000587201 CATSPER3Q86XQ3 398 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 THNSL1Q8IYQ7 743 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 LRRC43Q8N309 656 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 COLGALT1Q8NBJ5 622 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 RNF149Q8NC42 400 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 ERMNQ8TAM6 284 aa19.71■□□□□ 0.75
TPM4-206ENST00000587201 MED24O75448 989 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 SPATA31C1P0DKV0 1188 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 SKIP12755 728 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 XRCC6P12956 609 aaKnown RBP eCLIP19.7■□□□□ 0.74
TPM4-206ENST00000587201 ATF7P17544 494 aaPredicted RBP19.7■□□□□ 0.74
TPM4-206ENST00000587201 MXD4Q14582 209 aaPredicted RBP19.7■□□□□ 0.74
TPM4-206ENST00000587201 CSPP1Q1MSJ5 1256 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 CLLU1OSQ5K130 101 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 HELQQ8TDG4 1101 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 PABPC5Q96DU9 382 aaKnown RBP19.7■□□□□ 0.74
TPM4-206ENST00000587201 POLR3CQ9BUI4 534 aaPredicted RBP19.7■□□□□ 0.74
TPM4-206ENST00000587201 TRAIPQ9BWF2 469 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 MINDY3Q9H8M7 445 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 FAM105AQ9NUU6 356 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 CLDND1Q9NY35 253 aa19.7■□□□□ 0.74
TPM4-206ENST00000587201 ARID2Q68CP9 1835 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 NCK2O43639 380 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 USO1O60763 962 aaKnown RBP19.69■□□□□ 0.74
TPM4-206ENST00000587201 FGF18O76093 207 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 GJB2P29033 226 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 IRS1P35568 1242 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 RAB27AP51159 221 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 TFDP1Q14186 410 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 LEXMQ3ZCV2 418 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 MCTP1Q6DN14 999 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 LRRC55Q6ZSA7 311 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 PPP2R3CQ969Q6 453 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 NECAB3Q96P71 396 aaPredicted RBP19.69■□□□□ 0.74
TPM4-206ENST00000587201 NACC1Q96RE7 527 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 IGFLR1Q9H665 355 aa19.69■□□□□ 0.74
TPM4-206ENST00000587201 AGPAT5Q9NUQ2 364 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms