RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 PPME1Q9Y570 386 aa23.27■■□□□ 1.32
PTBP1-207ENST00000585932 TRAPPC10P48553 1259 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 RARRES1P49788 294 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 KCNQ1P51787 676 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 MRPS5P82675 430 aaKnown RBP23.26■■□□□ 1.31
PTBP1-207ENST00000585932 LAMTOR4Q0VGL1 99 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 CLLU1OSQ5K130 101 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 LRRC55Q6ZSA7 311 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 OTUD6AQ7L8S5 288 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 CASD1Q96PB1 797 aa23.26■■□□□ 1.31
PTBP1-207ENST00000585932 C11orf84Q9BUA3 381 aaPredicted RBP23.26■■□□□ 1.31
PTBP1-207ENST00000585932 ITGB1P05556 798 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 SRGAP2CP0DJJ0 459 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 CDC42EP1Q00587 391 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 ORC2Q13416 577 aaPredicted RBP23.25■■□□□ 1.31
PTBP1-207ENST00000585932 ECM1Q16610 540 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 FERMT3Q86UX7 667 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 KLHL23Q8NBE8 558 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 ASAP3Q8TDY4 903 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 PSPC1Q8WXF1 523 aaKnown RBP23.25■■□□□ 1.31
PTBP1-207ENST00000585932 CWH43Q9H720 699 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 ATP6V0A4Q9HBG4 840 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 ANKEF1Q9NU02 776 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 TYW1Q9NV66 732 aaKnown RBP23.25■■□□□ 1.31
PTBP1-207ENST00000585932 PLAGL2Q9UPG8 496 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 RWDD3Q9Y3V2 267 aa23.25■■□□□ 1.31
PTBP1-207ENST00000585932 PLXNA4Q9HCM2 1894 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 A0A0U1RQF3 1178 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 BMP1P13497 986 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 ZSCAN20P17040 1043 aaPredicted RBP23.24■■□□□ 1.31
PTBP1-207ENST00000585932 GNL2Q13823 731 aaKnown RBP23.24■■□□□ 1.31
PTBP1-207ENST00000585932 IL17AQ16552 155 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 TCEAL5Q5H9L2 206 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 POTEGQ6S5H5 508 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 SPPL3Q8TCT6 385 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 MTRQ99707 1265 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 PLVAPQ9BX97 442 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 BDP1A6H8Y1 2624 aa23.24■■□□□ 1.31
PTBP1-207ENST00000585932 MEIS3P2A8K0S8 358 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 CSPG5O95196 566 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 SFPQP23246 707 aaKnown RBP eCLIP23.23■■□□□ 1.31
PTBP1-207ENST00000585932 ARL2P36404 184 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 PTPROQ16827 1216 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 IL27Q8NEV9 243 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 P2RX5Q93086 422 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 HLA-CQ95604 372 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 POLR3CQ9BUI4 534 aaPredicted RBP23.23■■□□□ 1.31
PTBP1-207ENST00000585932 TUFT1Q9NNX1 390 aa23.23■■□□□ 1.31
PTBP1-207ENST00000585932 TCF20Q9UGU0 1960 aaKnown RBP23.22■■□□□ 1.31
PTBP1-207ENST00000585932 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.22■■□□□ 1.31
PTBP1-207ENST00000585932 HOXA11P31270 313 aaPredicted RBP23.22■■□□□ 1.31
PTBP1-207ENST00000585932 FXR2P51116 673 aaKnown RBP eCLIP23.22■■□□□ 1.31
PTBP1-207ENST00000585932 PTGDRQ13258 359 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 CATSPER4Q7RTX7 472 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 RNF149Q8NC42 400 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 RNF169Q8NCN4 708 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 TCP11Q8WWU5 503 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 NECAB3Q96P71 396 aaPredicted RBP23.22■■□□□ 1.31
PTBP1-207ENST00000585932 TRAIPQ9BWF2 469 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 TMEM117Q9H0C3 514 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 GPRC5CQ9NQ84 441 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 CHST12Q9NRB3 414 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 NOL7Q9UMY1 257 aaKnown RBP23.22■■□□□ 1.31
PTBP1-207ENST00000585932 COG5Q9UP83 839 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 PIN4Q9Y237 131 aaKnown RBP23.22■■□□□ 1.31
PTBP1-207ENST00000585932 PCDHGC5Q9Y5F6 944 aa23.22■■□□□ 1.31
PTBP1-207ENST00000585932 GAS2O43903 313 aaKnown RBP23.21■■□□□ 1.31
PTBP1-207ENST00000585932 DGAT1O75907 488 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 GLRA2P23416 452 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 IRS1P35568 1242 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 PHKA2P46019 1235 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 MCM2P49736 904 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 CAPSQ13938 189 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 COL19A1Q14993 1142 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 TIGD5Q53EQ6 642 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 MCTP1Q6DN14 999 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 EXOC8Q8IYI6 725 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 LPPQ93052 612 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 UBE2ZQ9H832 354 aaPredicted RBP23.21■■□□□ 1.31
PTBP1-207ENST00000585932 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.21■■□□□ 1.31
PTBP1-207ENST00000585932 AGPAT5Q9NUQ2 364 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 NCOR1O75376 2440 aa23.21■■□□□ 1.31
PTBP1-207ENST00000585932 PP2D1A8MPX8 630 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 USO1O60763 962 aaKnown RBP23.2■■□□□ 1.3
PTBP1-207ENST00000585932 XRCC6P12956 609 aaKnown RBP eCLIP23.2■■□□□ 1.35e-10■□□□□ 9.2
PTBP1-207ENST00000585932 RPA1P27694 616 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 GTF2F1P35269 517 aaKnown RBP eCLIP23.2■■□□□ 1.34e-8■□□□□ 9.6
PTBP1-207ENST00000585932 PBX3P40426 434 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 PTENP60484 403 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 LONRF3Q496Y0 759 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 UBXN11Q5T124 520 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 TWF2Q6IBS0 349 aaKnown RBP23.2■■□□□ 1.3
PTBP1-207ENST00000585932 SRGAP1Q7Z6B7 1085 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 COLGALT1Q8NBJ5 622 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 HELQQ8TDG4 1101 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 ADAMTS19Q8TE59 1207 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 INO80BQ9C086 356 aaPredicted RBP23.2■■□□□ 1.3
PTBP1-207ENST00000585932 LMAN2LQ9H0V9 348 aa23.2■■□□□ 1.3
PTBP1-207ENST00000585932 NSUN3Q9H649 340 aaKnown RBP23.2■■□□□ 1.3
PTBP1-207ENST00000585932 DACT1Q9NYF0 836 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms