RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 CAPSQ13938 189 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 DSC3Q14574 896 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 KARSQ15046 597 aaKnown RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 CDCA2Q69YH5 1023 aaPredicted RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 SRGAP1Q7Z6B7 1085 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 KSR1Q8IVT5 923 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 ASAP3Q8TDY4 903 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 KIFAP3Q92845 792 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 CDK5RAP3Q96JB5 506 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 CLIC6Q96NY7 704 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 FDXACB1Q9BRP7 624 aaPredicted RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 TRAIPQ9BWF2 469 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 INO80BQ9C086 356 aaPredicted RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 POLR3FQ9H1D9 316 aaPredicted RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 BLOC1S4Q9NUP1 217 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 STK17AQ9UEE5 414 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 ST3GAL5Q9UNP4 418 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 GINS2Q9Y248 185 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 COL4A4P53420 1690 aaPredicted RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 GJB5O95377 273 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 AMHP03971 560 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRFN3-202ENST00000585876 TXLNAP40222 546 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 PHKA2P46019 1235 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 PTENP60484 403 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 KRT85P78386 507 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 MAPK7Q13164 816 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 TFDP1Q14186 410 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 RINT1Q6NUQ1 792 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRFN3-202ENST00000585876 DAW1Q8N136 415 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 NLRP4Q96MN2 994 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 SCLT1Q96NL6 688 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 PPP1R16BQ96T49 567 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 RUSC1Q9BVN2 902 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 C17orf75Q9HAS0 396 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 RC3H2Q9HBD1 1191 aaKnown RBP12.88□□□□□ -0.35
LRFN3-202ENST00000585876 GPRC5CQ9NQ84 441 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 RGS18Q9NS28 235 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 PCDHA11Q9Y5I1 949 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 COL6A3P12111 3177 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 EYSQ5T1H1 3165 aa12.88□□□□□ -0.35
LRFN3-202ENST00000585876 ENPP3O14638 875 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 MGEA5O60502 916 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 PLA2G4BP0C869 781 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 DNAJB2P25686 324 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 NAMPTP43490 491 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 HTRA4P83105 476 aaPredicted RBP12.87□□□□□ -0.35
LRFN3-202ENST00000585876 PPP2R5AQ15172 486 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 RAB30Q15771 203 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 NAALADL2Q58DX5 795 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 SPECC1Q5M775 1068 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 RTN4RL1Q86UN2 441 aaPredicted RBP12.87□□□□□ -0.35
LRFN3-202ENST00000585876 LEO1Q8WVC0 666 aaPredicted RBP12.87□□□□□ -0.35
LRFN3-202ENST00000585876 LARP4BQ92615 738 aaKnown RBP12.87□□□□□ -0.35
LRFN3-202ENST00000585876 RAD54LQ92698 747 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 KCNN1Q92952 543 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 TOP1MTQ969P6 601 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 DRC1Q96MC2 740 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 PBX4Q9BYU1 374 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
LRFN3-202ENST00000585876 MINDY3Q9H8M7 445 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 CCDC39Q9UFE4 941 aa12.87□□□□□ -0.35
LRFN3-202ENST00000585876 A0A087X0B3 334 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 GRXCR1A8MXD5 290 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 C9IYK1 514 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 RBAK-RBAKDNI3L0D1 243 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 SARSP49591 514 aaKnown RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 FAM189BP81408 668 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 MBTD1Q05BQ5 628 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 NFX1Q12986 1120 aaKnown RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 ZRSR1Q15695 479 aaKnown RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 E2F4Q16254 413 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 AMHR2Q16671 573 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 ARSHQ5FYA8 562 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 FAM102BQ5T8I3 360 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 SHC4Q6S5L8 630 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 CCDC73Q6ZRK6 1079 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 SLC24A5Q71RS6 500 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 ZNF668Q96K58 619 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 DAXXQ9UER7 740 aaPredicted RBP12.86□□□□□ -0.35
LRFN3-202ENST00000585876 ODF2LQ9ULJ1 636 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 PCDHA7Q9UN72 937 aa12.86□□□□□ -0.35
LRFN3-202ENST00000585876 ATG2AQ2TAZ0 1938 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms