RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 CCND2P30279 289 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 MDH1P40925 334 aaKnown RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 ATP2C1P98194 919 aaPredicted RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 UGP2Q16851 508 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 RC3H1Q5TC82 1133 aaKnown RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 AGBL2Q5U5Z8 902 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 ATL2Q8NHH9 583 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 FAF2Q96CS3 445 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 KCNK16Q96T55 309 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 TIPINQ9BVW5 301 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 IP6K2Q9UHH9 426 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 DYNLT1P63172 113 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 ADCY1Q08828 1119 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 GOLGA8FQ08AF8 430 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 GOLGA8DPQ0D2H9 430 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 TBCCQ15814 346 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 SLC18A3Q16572 532 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 SUPT20HL1Q3ZLR7 823 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 NUDCD3Q8IVD9 361 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 TTC8Q8TAM2 541 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 ROPN1BQ9BZX4 212 aaPredicted RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 ROPN1Q9HAT0 212 aaPredicted RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 STX18Q9P2W9 335 aaKnown RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 EFCAB6Q5THR3 1501 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 DEAF1O75398 565 aaPredicted RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 MED21Q13503 144 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 LCORLQ8N3X6 602 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 RNF169Q8NCN4 708 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 BSDC1Q9NW68 430 aaPredicted RBP7.8□□□□□ -1.16
CDH8-214ENST00000585315 SLC8A2Q9UPR5 921 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 PPME1Q9Y570 386 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 A2ML1A8K2U0 1454 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 ERBB3P21860 1342 aa7.8□□□□□ -1.16
CDH8-214ENST00000585315 C16orf96A6NNT2 1141 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 KCNQ3O43525 872 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 PYGLP06737 847 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 IL10P22301 178 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 PRCPP42785 496 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 TNFAIP2Q03169 654 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 ABI1Q8IZP0 508 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 NXF1Q9UBU9 619 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 FBXO40Q9UH90 709 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 USP15Q9Y4E8 981 aaPredicted RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 PDXKO00764 312 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 CDC25AP30304 524 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 AARSP49588 968 aaKnown RBP eCLIP7.79□□□□□ -1.16
CDH8-214ENST00000585315 USP11P51784 963 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 HIC1Q14526 733 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 ZNF564Q8TBZ8 553 aaPredicted RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 H7C1W4 665 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 HMGB3O15347 200 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 FAM107AO95990 144 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 CYP2E1P05181 493 aaPredicted RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 SCP2P22307 547 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 SDC4P31431 198 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 IL1RL1Q01638 556 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 RASGRF1Q13972 1273 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 OR6B2Q6IFH4 312 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 SPATA21Q7Z572 469 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 ANKRD7Q92527 254 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 MSTO1Q9BUK6 570 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 KCND2Q9NZV8 630 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 LIMA1Q9UHB6 759 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 GOLGA8JA6NMD2 632 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 LARGE1O95461 756 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 PPP1R2P1Q96PQ5 205 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 UIMC1Q96RL1 719 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 BAZ2BQ9UIF8 2168 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 CFAP69A5D8W1 941 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 CLDN3O15551 220 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 RAD23BP54727 409 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 ABCE1P61221 599 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 CNGA3Q16281 694 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 HIF1AQ16665 826 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 EDRF1Q3B7T1 1238 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 PUS3Q9BZE2 481 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 WDR91A4D1P6 747 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 MTHFD1LQ6UB35 978 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 MAML3Q96JK9 1138 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 RNPC3Q96LT9 517 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 OSBPL1AQ9BXW6 950 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 DDX47Q9H0S4 455 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 CHCHD3Q9NX63 227 aaKnown RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 KLHL8Q9P2G9 620 aaPredicted RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 A0A1B0GW55 424 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 DUX4L2P0CJ85 424 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 DUX4L3P0CJ86 424 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 DUX4L4P0CJ87 422 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 DUX4L5P0CJ88 424 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 DUX4L6P0CJ89 424 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 DUX4L7P0CJ90 424 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 ITIH2P19823 946 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 STAT3P40763 770 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 KYAT1Q16773 422 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 TRIM45Q9H8W5 580 aaPredicted RBP7.79□□□□□ -1.16
CDH8-214ENST00000585315 DUX4Q9UBX2 424 aa7.79□□□□□ -1.16
CDH8-214ENST00000585315 BCAR1P56945 870 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms