RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	ALDH6A1	Q02252	535 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ADAM15	Q13444	863 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	EIF4H	Q15056	248 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CCDC181	Q5TID7	509 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	GRAMD4	Q6IC98	578 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	RPUSD2	Q8IZ73	545 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	RTKN2	Q8IZC4	609 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	BCL6B	Q8N143	479 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	EFHB	Q8N7U6	833 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754		Q8TCH9	128 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CHTF18	Q8WVB6	975 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MENT	Q9BUN1	341 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SLC5A4	Q9NY91	659 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TCEAL9	Q9UHQ7	104 aa		4.89	□□□□□ -1.63
PPP4R1-229	ENST00000584754	E2F8	A0AVK6	867 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CDC14B	O60729	498 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ZNF623	O75123	536 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	APOL3	O95236	402 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	EYA4	O95677	639 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	APEX1	P27695	318 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	GUCY2F	P51841	1108 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	EPHB1	P54762	984 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SESN3	P58005	492 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	DSG1	Q02413	1049 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CDSN	Q15517	529 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PRAMEF9	Q5VWM5	478 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TMEM200B	Q69YZ2	307 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TRIM68	Q6AZZ1	485 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ESRP1	Q6NXG1	681 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SPRED1	Q7Z699	444 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SMC1B	Q8NDV3	1235 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	DNER	Q8NFT8	737 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	RTF1	Q92541	710 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TUBGCP5	Q96RT8	1024 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SEMA4A	Q9H3S1	761 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MS4A5	Q9H3V2	200 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TOMM22	Q9NS69	142 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	THG1L	Q9NWX6	298 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ZFR2	Q9UPR6	939 aa	Known RBP	4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TCAF1	Q9Y4C2	921 aa		4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	AQR	O60306	1485 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TOPBP1	Q92547	1522 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TARBP1	Q13395	1621 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PATE3	B3GLJ2	98 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PRL	P01236	227 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	FNTB	P49356	437 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ROM1	Q03395	351 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	STAT4	Q14765	748 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SEPT7	Q16181	437 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PLEKHG6	Q3KR16	790 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ATP13A4	Q4VNC1	1196 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ODR4	Q5SWX8	454 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	GPR158	Q5T848	1215 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	AGBL4	Q5VU57	503 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	IQSEC1	Q6DN90	963 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SLFN12L	Q6IEE8	588 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	UNQ6494/PRO21346	Q6UXR6	183 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	USP30	Q70CQ3	517 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	FUK	Q8N0W3	1084 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	UBR7	Q8N806	425 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CFHR4	Q92496	578 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	C16orf92	Q96LL3	132 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	GPR101	Q96P66	508 aa	Predicted RBP	4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	OR14A2	Q96R54	314 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	KLC2	Q9H0B6	622 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MSL2	Q9HCI7	577 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	OAZ3	Q9UMX2	235 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PHLDB1	Q86UU1	1377 aa		4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TOP2A	P11388	1531 aa	Known RBP	4.87	□□□□□ -1.63
PPP4R1-229	ENST00000584754	UBA6	A0AVT1	1052 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ARHGAP6	O43182	974 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	FKBP9	O95302	570 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	CR2	P20023	1033 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SESN2	P58004	480 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	ATP2C1	P98194	919 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MYBPC3	Q14896	1274 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	HSP90AB2P	Q58FF8	381 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TIGD7	Q6NT04	549 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	FKBP9P1	Q75LS8	142 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	GPR135	Q8IZ08	494 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	RPGR	Q92834	1020 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	DVL3	Q92997	716 aa	Predicted RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	TMEM176A	Q96HP8	235 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MAML3	Q96JK9	1138 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	FOXB1	Q99853	325 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MYL10	Q9BUA6	226 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PLA2G12B	Q9BX93	195 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	POFUT1	Q9H488	388 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	AGO3	Q9H9G7	860 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	USP36	Q9P275	1121 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	PUF60	Q9UHX1	559 aa	Known RBP	4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	KCNG1	Q9UIX4	513 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SYNPO2	Q9UMS6	1093 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	MYRF	Q9Y2G1	1151 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754	SPO11	Q9Y5K1	396 aa		4.86	□□□□□ -1.63
PPP4R1-229	ENST00000584754		K7ESF4	209 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms