RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ACAP1Q15027 740 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 CLLU1OSQ5K130 101 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 CWC27Q6UX04 472 aaKnown RBP12.64□□□□□ -0.39
CASC3-208ENST00000583649 RALYLQ86SE5 291 aaKnown RBP12.64□□□□□ -0.39
CASC3-208ENST00000583649 TEX2Q8IWB9 1127 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 RSAD2Q8WXG1 361 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 AUTS2Q8WXX7 1259 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
CASC3-208ENST00000583649 KLHL5Q96PQ7 755 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 FAM193BQ96PV7 902 aaPredicted RBP12.64□□□□□ -0.39
CASC3-208ENST00000583649 NELL2Q99435 816 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 MXRA8Q9BRK3 442 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 OSBPL6Q9BZF3 934 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 CHST12Q9NRB3 414 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 SH2B1Q9NRF2 756 aaPredicted RBP12.64□□□□□ -0.39
CASC3-208ENST00000583649 ANGPTL2Q9UKU9 493 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 PCDHA6Q9UN73 950 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 PCDHA8Q9Y5H6 950 aa12.64□□□□□ -0.39
CASC3-208ENST00000583649 GPR32O75388 356 aa12.63□□□□□ -0.39
CASC3-208ENST00000583649 ATG7O95352 703 aa12.63□□□□□ -0.39
CASC3-208ENST00000583649 URODP06132 367 aa12.63□□□□□ -0.39
CASC3-208ENST00000583649 ZNF76P36508 570 aa12.63□□□□□ -0.39
CASC3-208ENST00000583649 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
CASC3-208ENST00000583649 COL9A2Q14055 689 aaPredicted RBP12.63□□□□□ -0.39
CASC3-208ENST00000583649 RSPO2Q6UXX9 243 aaPredicted RBP12.63□□□□□ -0.39
CASC3-208ENST00000583649 MAP3K14Q99558 947 aa12.63□□□□□ -0.39
CASC3-208ENST00000583649 MAN1C1Q9NR34 630 aa12.63□□□□□ -0.39
CASC3-208ENST00000583649 RNF19AQ9NV58 838 aa12.63□□□□□ -0.39
CASC3-208ENST00000583649 SALL3Q9BXA9 1300 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 ZFHX4Q86UP3 3567 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 INPPL1O15357 1258 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 LRP3O75074 770 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 GLUD1P00367 558 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 ALDH2P05091 517 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 GALTP07902 379 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 LAMP2P13473 410 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 TROAPQ12815 778 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 UBXN2BQ14CS0 331 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 NOMO2Q5JPE7 1267 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 HDAC7Q8WUI4 952 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 SMG7Q92540 1137 aaKnown RBP12.62□□□□□ -0.39
CASC3-208ENST00000583649 PGBD4Q96DM1 585 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 FAM167AQ96KS9 214 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 KANSL3Q9P2N6 904 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 MRPS17Q9Y2R5 130 aaKnown RBP12.62□□□□□ -0.39
CASC3-208ENST00000583649 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
CASC3-208ENST00000583649 LOXHD1Q8IVV2 1947 aa12.62□□□□□ -0.39
CASC3-208ENST00000583649 IGKV6D-21A0A0A0MT36 114 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 SLC30A4O14863 429 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 C22orf31O95567 290 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 FOSP01100 380 aaPredicted RBP12.61□□□□□ -0.39
CASC3-208ENST00000583649 CNPP09543 421 aaKnown RBP12.61□□□□□ -0.39
CASC3-208ENST00000583649 KCNA4P22459 653 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 RAB27AP51159 221 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 AK2P54819 239 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 COL9A3Q14050 684 aaPredicted RBP12.61□□□□□ -0.39
CASC3-208ENST00000583649 CEP55Q53EZ4 464 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 ZBTB41Q5SVQ8 909 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 TWF2Q6IBS0 349 aaKnown RBP12.61□□□□□ -0.39
CASC3-208ENST00000583649 SWSAP1Q6NVH7 229 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 EFCAB12Q6NXP0 572 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 MTSS1LQ765P7 747 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 ZBTB44Q8NCP5 570 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 NLRP7Q8WX94 980 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 FOXQ1Q9C009 403 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 INO80BQ9C086 356 aaPredicted RBP12.61□□□□□ -0.39
CASC3-208ENST00000583649 PLEKHA4Q9H4M7 779 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 AGO4Q9HCK5 861 aaKnown RBP12.61□□□□□ -0.39
CASC3-208ENST00000583649 DENND4AQ7Z401 1863 aa12.61□□□□□ -0.39
CASC3-208ENST00000583649 CEP250Q9BV73 2442 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 OTOGLQ3ZCN5 2332 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 FAM170BA6NMN3 283 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 ANHXE9PGG2 379 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 NR1I2O75469 434 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 C1RP00736 705 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 SSBP05455 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
CASC3-208ENST00000583649 SFPQP23246 707 aaKnown RBP eCLIP12.6□□□□□ -0.39
CASC3-208ENST00000583649 MLF2Q15773 248 aaPredicted RBP12.6□□□□□ -0.39
CASC3-208ENST00000583649 C20orf194Q5TEA3 1177 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 IL31Q6EBC2 164 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 LAIR1Q6GTX8 287 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 ABHD15Q6UXT9 468 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 GET4Q7L5D6 327 aaPredicted RBP12.6□□□□□ -0.39
CASC3-208ENST00000583649 ZNF598Q86UK7 904 aaKnown RBP12.6□□□□□ -0.39
CASC3-208ENST00000583649 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
CASC3-208ENST00000583649 CELF5Q8N6W0 485 aaKnown RBP12.6□□□□□ -0.39
CASC3-208ENST00000583649 TRAIPQ9BWF2 469 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 GCOM2Q9BZD3 368 aaPredicted RBP12.6□□□□□ -0.39
CASC3-208ENST00000583649 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 ZDHHC7Q9NXF8 308 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 INPP5FQ9Y2H2 1132 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 FAN1Q9Y2M0 1017 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 NUMBLQ9Y6R0 609 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 LAMA4Q16363 1823 aa12.6□□□□□ -0.39
CASC3-208ENST00000583649 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.59□□□□□ -0.39
CASC3-208ENST00000583649 POTEMA6NI47 508 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms