RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 RWDD3Q9Y3V2 267 aa15.56■□□□□ 0.08
GGA3-215ENST00000582821 MTCH2Q9Y6C9 303 aa15.56■□□□□ 0.08
GGA3-215ENST00000582821 ADGRA3Q8IWK6 1321 aa15.56■□□□□ 0.08
GGA3-215ENST00000582821 FNDC1Q4ZHG4 1894 aaPredicted RBP15.56■□□□□ 0.08
GGA3-215ENST00000582821 A0A087WWV3 80 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 A0A0U1RQF3 1178 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 C5orf67F2Z3F1 127 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 GTPBP6O43824 516 aaPredicted RBP15.55■□□□□ 0.08
GGA3-215ENST00000582821 RB1P06400 928 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 SFPQP23246 707 aaKnown RBP eCLIP15.55■□□□□ 0.08
GGA3-215ENST00000582821 GRB10Q13322 594 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 PCBP1Q15365 356 aaKnown RBP eCLIP15.55■□□□□ 0.08
GGA3-215ENST00000582821 EPC2Q52LR7 807 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
GGA3-215ENST00000582821 TMEM192Q8IY95 271 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 C17orf80Q9BSJ5 609 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 DACT1Q9NYF0 836 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 UNC80Q8N2C7 3258 aa15.55■□□□□ 0.08
GGA3-215ENST00000582821 REV3LO60673 3130 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 BRWD1Q9NSI6 2320 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 H3BNC9 293 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 CSDE1O75534 798 aaKnown RBP15.54■□□□□ 0.08
GGA3-215ENST00000582821 EOMESO95936 686 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 SRGAP2CP0DJJ0 459 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 SYT1P21579 422 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 BMPR1AP36894 532 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 CCT6AP40227 531 aaKnown RBP15.54■□□□□ 0.08
GGA3-215ENST00000582821 PTENP60484 403 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 BTG3Q14201 252 aaPredicted RBP15.54■□□□□ 0.08
GGA3-215ENST00000582821 ECM1Q16610 540 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 MCPH1Q8NEM0 835 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 FBXO22Q8NEZ5 403 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 NLRP4Q96MN2 994 aa15.54■□□□□ 0.08
GGA3-215ENST00000582821 CCDC43Q96MW1 224 aaKnown RBP15.54■□□□□ 0.08
GGA3-215ENST00000582821 HOXA2O43364 376 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 ZNF623O75123 536 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 BMP15O95972 392 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 FGFR4P22455 802 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 POTEGQ6S5H5 508 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 ZNF598Q86UK7 904 aaKnown RBP15.53■□□□□ 0.08
GGA3-215ENST00000582821 ECHDC2Q86YB7 292 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 KCTD17Q8N5Z5 321 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 RNF149Q8NC42 400 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 SLC17A8Q8NDX2 589 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 MMTAG2Q9BU76 263 aaKnown RBP15.53■□□□□ 0.08
GGA3-215ENST00000582821 PLVAPQ9BX97 442 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 NFKBIZQ9BYH8 718 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 BMP2KQ9NSY1 1161 aaPredicted RBP15.53■□□□□ 0.08
GGA3-215ENST00000582821 MTUS1Q9ULD2 1270 aa15.53■□□□□ 0.08
GGA3-215ENST00000582821 CYP11B2P19099 503 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 GLRA2P23416 452 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 TFDP1Q14186 410 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 NAALADL2Q58DX5 795 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 HYIQ5T013 277 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 FAM102BQ5T8I3 360 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 PADI6Q6TGC4 694 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 CATSPER4Q7RTX7 472 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 ASAP3Q8TDY4 903 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 SNX29Q8TEQ0 813 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 MINDY3Q9H8M7 445 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 KIAA1024Q9UPX6 916 aa15.52■□□□□ 0.08
GGA3-215ENST00000582821 VPS37CA5D8V6 355 aaPredicted RBP15.51■□□□□ 0.07
GGA3-215ENST00000582821 ARHGEF35A5YM69 484 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 SLC26A4O43511 780 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 USO1O60763 962 aaKnown RBP15.51■□□□□ 0.07
GGA3-215ENST00000582821 SKIP12755 728 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 HOXA11P31270 313 aaPredicted RBP15.51■□□□□ 0.07
GGA3-215ENST00000582821 PHKA2P46019 1235 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 GPM6BQ13491 265 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 GDPD5Q8WTR4 605 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 RSPH1Q8WYR4 309 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 P2RX5Q93086 422 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 TMEM117Q9H0C3 514 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 AGPAT5Q9NUQ2 364 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 DDX19AQ9NUU7 478 aaKnown RBP15.51■□□□□ 0.07
GGA3-215ENST00000582821 RNF19AQ9NV58 838 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 DNM3Q9UQ16 869 aa15.51■□□□□ 0.07
GGA3-215ENST00000582821 MRPL42Q9Y6G3 142 aaKnown RBP15.51■□□□□ 0.07
GGA3-215ENST00000582821 COL4A4P53420 1690 aaPredicted RBP15.51■□□□□ 0.07
GGA3-215ENST00000582821 TBKBP1A7MCY6 615 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 PP2D1A8MPX8 630 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 EYA4O95677 639 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 PDIA4P13667 645 aaKnown RBP15.5■□□□□ 0.07
GGA3-215ENST00000582821 ATF7P17544 494 aaPredicted RBP15.5■□□□□ 0.07
GGA3-215ENST00000582821 CDC25AP30304 524 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 AXLP30530 894 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 CTNNB1P35222 781 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 GATMP50440 423 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 RAB27AP51159 221 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 RESTQ13127 1097 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 CAPSQ13938 189 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 HSCBQ8IWL3 235 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 MRPL38Q96DV4 380 aaKnown RBP15.5■□□□□ 0.07
GGA3-215ENST00000582821 AK8Q96MA6 479 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 CASD1Q96PB1 797 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 C11orf84Q9BUA3 381 aaPredicted RBP15.5■□□□□ 0.07
GGA3-215ENST00000582821 LMAN2LQ9H0V9 348 aa15.5■□□□□ 0.07
GGA3-215ENST00000582821 POLR3FQ9H1D9 316 aaPredicted RBP15.5■□□□□ 0.07
GGA3-215ENST00000582821 BHMT2Q9H2M3 363 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms