RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 DDX1Q92499 740 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 LPPQ93052 612 aa16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 ZNF707Q96C28 371 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 TMEM121BQ9BXQ6 578 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 MAP3K20Q9NYL2 800 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 DNAJB4Q9UDY4 337 aa16.15■□□□□ 0.18
CSNK1D-213ENST00000580446 GIPC1O14908 333 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 KCNK5O95279 499 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 RBM25P49756 843 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 SIM2Q14190 667 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 ZBTB41Q5SVQ8 909 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 USP17L6PQ6QN14 398 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 NLRX1Q86UT6 975 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 DGKHQ86XP1 1220 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 NME8Q8N427 588 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 ZCCHC14Q8WYQ9 949 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 NXPE3Q969Y0 559 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 MTMR8Q96EF0 704 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 BORCS6Q96GS4 357 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 EMILIN2Q9BXX0 1053 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 PIDD1Q9HB75 910 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 FAM217BQ9NTX9 383 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 INPP5FQ9Y2H2 1132 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 IGSF10Q6WRI0 2623 aa16.14■□□□□ 0.17
CSNK1D-213ENST00000580446 KLRF2D3W0D1 207 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 TM4SF5O14894 197 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 STAM2O75886 525 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 ITGB5P18084 799 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 SLC11A1P49279 550 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 POLGP54098 1239 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 ALX1Q15699 326 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 SOWAHCQ53LP3 525 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 PCNX4Q63HM2 1172 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 ENAHQ8N8S7 591 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 KXD1Q9BQD3 176 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 SMOC1Q9H4F8 434 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 AZI2Q9H6S1 392 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 MIA3Q5JRA6 1907 aa16.13■□□□□ 0.17
CSNK1D-213ENST00000580446 UNC79Q9P2D8 2635 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 HRO43593 1189 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 HOXC13P31276 330 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 NTHL1P78549 312 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 GIT2Q14161 759 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 TRMT1LQ7Z2T5 733 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 GIMAP8Q8ND71 665 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 CMASQ8NFW8 434 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 ESR2Q92731 530 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 NRDE2Q9H7Z3 1164 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 ZBTB40Q9NUA8 1239 aa16.12■□□□□ 0.17
CSNK1D-213ENST00000580446 BPTFQ12830 3046 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 MEIS3P2A8K0S8 358 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 CHURC1-FNTBB4DL54 471 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 LRP3O75074 770 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 GALTP07902 379 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 FNTBP49356 437 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 CRYBB1P53674 252 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 AK2P54819 239 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 FZD5Q13467 585 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 C19orf48Q6RUI8 117 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 CELF5Q8N6W0 485 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 CLDN23Q96B33 292 aa16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 ZSCAN10Q96SZ4 725 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 NDRG2Q9UN36 371 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-213ENST00000580446 MYH6P13533 1939 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 A0A0D9SFI3 127 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 B4E1Z4 1266 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 LILRB3O75022 631 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 GPR32O75388 356 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 CSDE1O75534 798 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 PRKCQQ04759 706 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 ODR4Q5SWX8 454 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 STPG1Q5TH74 334 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 HEATR6Q6AI08 1181 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 TAS1R1Q7RTX1 841 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 ZNF598Q86UK7 904 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 ZNF589Q86UQ0 364 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 SMARCC2Q8TAQ2 1214 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 MRPL9Q9BYD2 267 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 ADAM33Q9BZ11 813 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 JPH1Q9HDC5 661 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 TBC1D13Q9NVG8 400 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 MAD2L2Q9UI95 211 aa16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 SMG1Q96Q15 3661 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-213ENST00000580446 TEX28O15482 410 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 ZSCAN20P17040 1043 aaPredicted RBP16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 STAT5BP51692 787 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 MTMR1Q13613 665 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 PALB2Q86YC2 1186 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 ZNF280BQ86YH2 543 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 GLYCTKQ8IVS8 523 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 METTL13Q8N6R0 699 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 GATA6Q92908 595 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 PHKBQ93100 1093 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 GPRASP2Q96D09 838 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 OSBPL6Q9BZF3 934 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 HEBP1Q9NRV9 189 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.09■□□□□ 0.177e-8■■■■■ 49.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms