RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 FBXL6Q8N531 539 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 LINC01465Q8N7H1 131 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 TMEM169Q96HH4 297 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 CASD1Q96PB1 797 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 SLC26A6Q9BXS9 759 aa15.04■□□□□ -0
TRAF4-214ENST00000580073 GCOM2Q9BZD3 368 aaPredicted RBP15.04■□□□□ -0
TRAF4-214ENST00000580073 SEPT9Q9UHD8 586 aaPredicted RBP15.04■□□□□ -0
TRAF4-214ENST00000580073 A0A0U1RQF3 1178 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 CHMP2AO43633 222 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 DKC1O60832 514 aaKnown RBP eCLIP15.03■□□□□ -0
TRAF4-214ENST00000580073 DARSP14868 501 aaKnown RBP15.03■□□□□ -0
TRAF4-214ENST00000580073 IFNAR1P17181 557 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 ALDH7A1P49419 539 aaKnown RBP15.03■□□□□ -0
TRAF4-214ENST00000580073 RAB27AP51159 221 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 NUBP1P53384 320 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 NLRP5P59047 1200 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 ERVFC1P60507 584 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 ITIH3Q06033 890 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 STK3Q13188 491 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 ME3Q16798 604 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 PTPN21Q16825 1174 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 CPLX2Q6PUV4 134 aaKnown RBP15.03■□□□□ -0
TRAF4-214ENST00000580073 MIER3Q7Z3K6 550 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 ZNF410Q86VK4 478 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 RNF169Q8NCN4 708 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 LENG9Q96B70 501 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 ZNF274Q96GC6 653 aaPredicted RBP15.03■□□□□ -0
TRAF4-214ENST00000580073 ADAMTS10Q9H324 1103 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 CHST12Q9NRB3 414 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 DZANK1Q9NVP4 752 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 PCDHGC5Q9Y5F6 944 aa15.03■□□□□ -0
TRAF4-214ENST00000580073 CPLX1O14810 134 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 MSH4O15457 936 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 CA8P35219 290 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 MTHFRP42898 656 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 SCRN1Q12765 414 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 MTMR3Q13615 1198 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 KCNC3Q14003 757 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 XKR3Q5GH77 459 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 GALNT17Q6IS24 598 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 MOXD1Q6UVY6 613 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 EXOC8Q8IYI6 725 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 SLC5A5Q92911 643 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 PHKBQ93100 1093 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 RIPOR3Q96MK2 946 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 VPS54Q9P1Q0 977 aa15.02■□□□□ -0
TRAF4-214ENST00000580073 MYO10Q9HD67 2058 aa15.02□□□□□ -0.01
TRAF4-214ENST00000580073 CTDNEP1O95476 244 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 Q4G0T1 1027 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 TWF2Q6IBS0 349 aaKnown RBP15.01□□□□□ -0.01
TRAF4-214ENST00000580073 LLGL2Q6P1M3 1020 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 GLB1LQ6UWU2 654 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 UBALD2Q8IYN6 164 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 SLC39A11Q8N1S5 342 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 NECAB1Q8N987 351 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 VN1R2Q8NFZ6 395 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 TRAIPQ9BWF2 469 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 UNC45AQ9H3U1 944 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 HCSTQ9UBK5 93 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 PCDHA4Q9UN74 947 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 PPME1Q9Y570 386 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 C2orf16Q68DN1 1984 aa15.01□□□□□ -0.01
TRAF4-214ENST00000580073 ZNF862O60290 1169 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 PFKFB2O60825 505 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 DEXIO95424 95 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 POLGP54098 1239 aaPredicted RBP15□□□□□ -0.01
TRAF4-214ENST00000580073 SSRP1Q08945 709 aaKnown RBP15□□□□□ -0.01
TRAF4-214ENST00000580073 RABEP1Q15276 862 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 MTERF2Q49AM1 385 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 CLLU1OSQ5K130 101 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 PPFIBP1Q86W92 1011 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 HELQQ8TDG4 1101 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 TBCKQ8TEA7 893 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 NIFKQ9BYG3 293 aaKnown RBP15□□□□□ -0.01
TRAF4-214ENST00000580073 UPF2Q9HAU5 1272 aaKnown RBP15□□□□□ -0.01
TRAF4-214ENST00000580073 TSHZ2Q9NRE2 1034 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 RNF19AQ9NV58 838 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 HCFC2Q9Y5Z7 792 aa15□□□□□ -0.01
TRAF4-214ENST00000580073 ZDBF2Q9HCK1 2354 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 HIDE1A8MVS5 230 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 ADAMTS3O15072 1205 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 ZC3H11AO75152 810 aaKnown RBP eCLIP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 XBP1P17861 261 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 RNASELQ05823 741 aaKnown RBP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 TARBP2Q15633 366 aaKnown RBP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 LRRC55Q6ZSA7 311 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 ZNF598Q86UK7 904 aaKnown RBP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 MRPL43Q8N983 215 aaKnown RBP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 DAGLBQ8NCG7 672 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 URGCPQ8TCY9 931 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 SLC7A3Q8WY07 619 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 PGBD4Q96DM1 585 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 NAP1L4Q99733 375 aaKnown RBP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 S1PR5Q9H228 398 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 ADAM7Q9H2U9 754 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 SORCS3Q9UPU3 1222 aa14.99□□□□□ -0.01
TRAF4-214ENST00000580073 PIN4Q9Y237 131 aaKnown RBP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 MTCL1Q9Y4B5 1905 aaKnown RBP14.99□□□□□ -0.01
TRAF4-214ENST00000580073 TRIOO75962 3097 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms