RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 SMTNL1A8MU46 457 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 EIF3DO15371 548 aaKnown RBP eCLIP18.17■□□□□ 0.5
ERCC4-208ENST00000576348 SRGAP2CP0DJJ0 459 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 CD44P16070 742 aaKnown RBP18.17■□□□□ 0.5
ERCC4-208ENST00000576348 SCP2P22307 547 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 GLRA2P23416 452 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 MARCH8Q5T0T0 291 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 HAUS6Q7Z4H7 955 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 RSPH3Q86UC2 560 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 NELFCDQ8IXH7 590 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 SYCP3Q8IZU3 236 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 AOPEPQ8N6M6 819 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 BSNDQ8WZ55 320 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 NLRP4Q96MN2 994 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 TMEM106CQ9BVX2 250 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 GTF2IRD1Q9UHL9 959 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 OGDHLQ9ULD0 1010 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 UBE4BO95155 1302 aa18.17■□□□□ 0.5
ERCC4-208ENST00000576348 SMIM35A0A1B0GVV1 85 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 MBLAC1A4D2B0 266 aaPredicted RBP18.16■□□□□ 0.5
ERCC4-208ENST00000576348 PRPF6O94906 941 aaKnown RBP18.16■□□□□ 0.5
ERCC4-208ENST00000576348 GJB1P08034 283 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 PHKA2P46019 1235 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 NCKAP1LP55160 1127 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 STX17P56962 302 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 PTPN11Q06124 597 aaPredicted RBP18.16■□□□□ 0.5
ERCC4-208ENST00000576348 STRN3Q13033 797 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 DRP2Q13474 957 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 GSE1Q14687 1217 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 COBLL1Q53SF7 1204 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 TAF2Q6P1X5 1199 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 ZNF720Q7Z2F6 126 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 RNF149Q8NC42 400 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 GLIS3Q8NEA6 775 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 U2AF1L4Q8WU68 220 aaKnown RBP18.16■□□□□ 0.5
ERCC4-208ENST00000576348 P2RX5Q93086 422 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 HVCN1Q96D96 273 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 ACCSQ96QU6 501 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 BPIFA3Q9BQP9 254 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 KIFC3Q9BVG8 833 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 C2orf40Q9H1Z8 148 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 CBX8Q9HC52 389 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 RWDD2AQ9UIY3 292 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 EXOC7Q9UPT5 735 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 PHLPP2Q6ZVD8 1323 aa18.16■□□□□ 0.5
ERCC4-208ENST00000576348 DENND3A2RUS2 1198 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 TREHO43280 583 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 SGPL1O95470 568 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 CCNE1P24864 410 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 CASP5P51878 434 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 EFNA5P52803 228 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 ZNF200P98182 395 aaPredicted RBP18.15■□□□□ 0.5
ERCC4-208ENST00000576348 CDC42EP1Q00587 391 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 MYL5Q02045 173 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
ERCC4-208ENST00000576348 CAPSQ13938 189 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 ZC2HC1CQ53FD0 456 aaPredicted RBP18.15■□□□□ 0.5
ERCC4-208ENST00000576348 SESTD1Q86VW0 696 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 GAS2L3Q86XJ1 694 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 NLRP7Q8WX94 980 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 BICD1Q96G01 975 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 SEZ6LQ9BYH1 1024 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 FGFBP2Q9BYJ0 223 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 MCOLN1Q9GZU1 580 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 TMEM206Q9H813 350 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 LOXHD1Q8IVV2 1947 aa18.15■□□□□ 0.5
ERCC4-208ENST00000576348 M0QZ92 97 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 CALUO43852 315 aaPredicted RBP18.14■□□□□ 0.49
ERCC4-208ENST00000576348 VTNP04004 478 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 RPLP2P05387 115 aaKnown RBP18.14■□□□□ 0.49
ERCC4-208ENST00000576348 PTGISQ16647 500 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 KNOP1Q1ED39 458 aaKnown RBP18.14■□□□□ 0.49
ERCC4-208ENST00000576348 BMT2Q1RMZ1 405 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 GDF6Q6KF10 455 aaPredicted RBP18.14■□□□□ 0.49
ERCC4-208ENST00000576348 RUFY4Q6ZNE9 571 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 EPM2AIP1Q7L775 607 aaPredicted RBP18.14■□□□□ 0.49
ERCC4-208ENST00000576348 HS2ST1Q7LGA3 356 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 KSR1Q8IVT5 923 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 KIAA0319LQ8IZA0 1049 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 LINC01465Q8N7H1 131 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 TMEM161BQ8NDZ6 487 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 GOLGA5Q8TBA6 731 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 PPP1R16BQ96T49 567 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 NTPCRQ9BSD7 190 aaKnown RBP18.14■□□□□ 0.49
ERCC4-208ENST00000576348 RBSNQ9H1K0 784 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 ST6GALNAC4Q9H4F1 302 aa18.14■□□□□ 0.49
ERCC4-208ENST00000576348 MYH9P35579 1960 aaKnown RBP18.13■□□□□ 0.49
ERCC4-208ENST00000576348 K7ERI5 159 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 TMEM132AQ24JP5 1023 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 LUZP1Q86V48 1076 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 ZNF710Q8N1W2 664 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 NME8Q8N427 588 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 ENOX1Q8TC92 643 aaKnown RBP18.13■□□□□ 0.49
ERCC4-208ENST00000576348 ZNF507Q8TCN5 953 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 DNAJB3Q8WWF6 145 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 ZNF668Q96K58 619 aaPredicted RBP18.13■□□□□ 0.49
ERCC4-208ENST00000576348 FIZ1Q96SL8 496 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 TBX20Q9UMR3 447 aa18.13■□□□□ 0.49
ERCC4-208ENST00000576348 GINS2Q9Y248 185 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms